RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 RTN3O95197 1032 aaPredicted RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 PGM3O95394 542 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 SGPL1O95470 568 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 AMHP03971 560 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CYP1A1P04798 512 aaPredicted RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 S100A9P06702 114 aaKnown RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ADRB2P07550 413 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 QDPRP09417 244 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 SRGAP2CP0DJJ0 459 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CALM1P0DP23 149 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CALM2P0DP24 149 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CALM3P0DP25 149 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 FGFR1P11362 822 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 GNAT1P11488 350 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ZNF28P17035 718 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 IL11P20809 199 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 KELP23276 732 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CHMP24386 653 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 PEX2P28328 305 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 GUCY1A2P33402 732 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 NF2P35240 595 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 HOXD13P35453 343 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 IGFALSP35858 605 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ARFIP1P53367 373 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 NR1H2P55055 460 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 IFI35P80217 286 aaPredicted RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 KRT17Q04695 432 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ITIH3Q06033 890 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 SPAG1Q07617 926 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CETN1Q12798 172 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 TROAPQ12815 778 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 BNIP1Q12981 228 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 MAPK7Q13164 816 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 TUSC3Q13454 348 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CUL2Q13617 745 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ERV3-1Q14264 604 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 RCN1Q15293 331 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 TDRD12Q587J7 1177 aaKnown RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 RNF220Q5VTB9 566 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ARL6IP4Q66PJ3 421 aaKnown RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 TPGS2Q68CL5 300 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 RAB11FIP2Q7L804 512 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 PRPF39Q86UA1 669 aaKnown RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 PROSER1Q86XN7 944 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 EFCAB13Q8IY85 973 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 KRT78Q8N1N4 520 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 AADATQ8N5Z0 425 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 PPM1NQ8N819 430 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 FANCBQ8NB91 859 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CEP70Q8NHQ1 597 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 DCAF4Q8WV16 495 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 RAPGEF5Q92565 580 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 KRT35Q92764 455 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 SMARCE1Q969G3 411 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 RRP36Q96EU6 259 aaKnown RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 MAELQ96JY0 434 aaKnown RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CABS1Q96KC9 395 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CLIC6Q96NY7 704 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ACAP3Q96P50 834 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 PTPN18Q99952 460 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 CITED2Q99967 270 aaPredicted RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 BRIP1Q9BX63 1249 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 THAP9Q9H5L6 903 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 IPPKQ9H8X2 491 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 SLC6A20Q9NP91 592 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 LRFN1Q9P244 771 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 GRHPRQ9UBQ7 328 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 UBA2Q9UBT2 640 aaPredicted RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 LIMA1Q9UHB6 759 aaKnown RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 TRMT112Q9UI30 125 aaKnown RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ING1Q9UK53 422 aaPredicted RBP4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 PADI4Q9UM07 663 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 TMEM5Q9Y2B1 443 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 LAMB2P55268 1798 aa4.2□□□□□ -1.74
PRPF38B-205ENST00000485810 ITGB4P16144 1822 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 NUP98P52948 1817 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 hCG_1807616A0A1W2PRN6 198 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CTAGE15A4D2H0 777 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TISP43B9A030 160 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 B9A039 149 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TMEM232C9JQI7 657 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 KRIT1O00522 736 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 MAP2K7O14733 419 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 POLR2DO15514 142 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ASAP2O43150 1006 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 FMO6PO60774 539 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 SMPD2O60906 423 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 MFAP3LO75121 409 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TSPAN9O75954 239 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 NPPAP01160 153 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 SOD2P04179 222 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CKMP06732 381 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CTAGE8P0CG41 777 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CKMT1AP12532 417 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PORP16435 677 aaPredicted RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 EEF1DP29692 281 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 HOXA7P31268 230 aaPredicted RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 KRT2P35908 639 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PIK3CBP42338 1070 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 GLRBP48167 497 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms