RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 AFF3P51826 1226 aaKnown RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 LILRA4P59901 499 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CCT2P78371 535 aaKnown RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 SAFBQ15424 915 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 NPY5RQ15761 445 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 INAVAQ3KP66 663 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 ADCK5Q3MIX3 580 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 LY6G5CQ5SRR4 150 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 PRAMEF14Q5SWL7 426 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 EGFLAMQ63HQ2 1017 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 NLRC3Q7RTR2 1065 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 TMC3Q7Z5M5 1100 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 GATAD2AQ86YP4 633 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CILP2Q8IUL8 1156 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 SLITRK4Q8IW52 837 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 DHX40Q8IX18 779 aaKnown RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 THEM5Q8N1Q8 247 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 FSIP1Q8NA03 581 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CADM4Q8NFZ8 388 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 SNRNP27Q8WVK2 155 aaKnown RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 IGSF8Q969P0 613 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 DIRC2Q96SL1 478 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 MRPL4Q9BYD3 311 aaKnown RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 RWDD1Q9H446 243 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CD248Q9HCU0 757 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 TMLHEQ9NVH6 421 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 SMPD4Q9NXE4 827 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 WSB2Q9NYS7 404 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 HSPBP1Q9NZL4 362 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 UBQLN1Q9UMX0 589 aaKnown RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CLCA2Q9UQC9 943 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 ANKRD6Q9Y2G4 727 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 ZNF281Q9Y2X9 895 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 ABCA12Q86UK0 2595 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 AHCTF1Q8WYP5 2266 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 MYLKQ15746 1914 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 KNL1Q8NG31 2342 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 KCNJ18B7U540 433 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 WASH3PC4AMC7 463 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 K7ENP7 123 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 CYB561D2O14569 222 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 ABLIM1O14639 778 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 SLC9A3R1O14745 358 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-210ENST00000485247 TULP3O75386 442 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 MPOP05164 745 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 IFNAR1P17181 557 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 CYP3A5P20815 502 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 PROZP22891 400 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 ACADVLP49748 655 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 RIPPLY3P57055 190 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 RNF4P78317 190 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 TLE1Q04724 770 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 GAD2Q05329 585 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 SMARCB1Q12824 385 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 ZBTB6Q15916 424 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 ZNF394Q53GI3 561 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 KCNT1Q5JUK3 1230 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 BTBD8Q5XKL5 378 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 INO80CQ6PI98 192 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-210ENST00000485247 KDM7AQ6ZMT4 941 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 PIK3AP1Q6ZUJ8 805 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 METTL23Q86XA0 190 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 CATSPER3Q86XQ3 398 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 DCP1BQ8IZD4 617 aaKnown RBP5.68□□□□□ -1.5
PTPN4-210ENST00000485247 TERB1Q8NA31 727 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 PDZD8Q8NEN9 1154 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 BRF1Q92994 677 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 NKD1Q969G9 470 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 TRMT2BQ96GJ1 504 aaKnown RBP5.68□□□□□ -1.5
PTPN4-210ENST00000485247 HIC2Q96JB3 615 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 ZNF578Q96N58 590 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-210ENST00000485247 AIFM3Q96NN9 605 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 MTMR9Q96QG7 549 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 GABRG3Q99928 467 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 SPON2Q9BUD6 331 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 G6PC3Q9BUM1 346 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 RNF32Q9H0A6 362 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 RNF38Q9H0F5 515 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPN4-210ENST00000485247 RPF1Q9H9Y2 349 aaKnown RBP5.68□□□□□ -1.5
PTPN4-210ENST00000485247 NCOA5Q9HCD5 579 aaKnown RBP5.68□□□□□ -1.5
PTPN4-210ENST00000485247 ITM2CQ9NQX7 267 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 STARD5Q9NSY2 213 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 DEC1Q9P2X7 70 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 KCNJ14Q9UNX9 436 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 MAN2B2Q9Y2E5 1009 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 PCDHB1Q9Y5F3 818 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 PCDHGB7Q9Y5F8 929 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 CPQQ9Y646 472 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 CITO14578 2027 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 MYOFQ9NZM1 2061 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 PHLPP2Q6ZVD8 1323 aa5.68□□□□□ -1.5
PTPN4-210ENST00000485247 ANK1P16157 1881 aa5.67□□□□□ -1.5
PTPN4-210ENST00000485247 TMEM131Q92545 1883 aa5.67□□□□□ -1.5
PTPN4-210ENST00000485247 TTC26A0AVF1 554 aa5.67□□□□□ -1.5
PTPN4-210ENST00000485247 BLACEA4D250 179 aa5.67□□□□□ -1.5
PTPN4-210ENST00000485247 ARHGEF35A5YM69 484 aa5.67□□□□□ -1.5
PTPN4-210ENST00000485247 DBX1A6NMT0 343 aa5.67□□□□□ -1.5
PTPN4-210ENST00000485247 LACTBL1A8MY62 500 aa5.67□□□□□ -1.5
PTPN4-210ENST00000485247 LAD1O00515 517 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms