RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 MARK1Q9P0L2 795 aa14.54□□□□□ -0.08
SRSF6-202ENST00000483871 ZNF212Q9UDV6 495 aa14.54□□□□□ -0.08
SRSF6-202ENST00000483871 A0A1B0GVM2 712 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 TCAF2A6NFQ2 919 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 H0Y626 953 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 DCLK1O15075 740 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 ADH1CP00326 375 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 RHOQP17081 205 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 CDH4P55283 916 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 MESP2Q0VG99 397 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 ITPRIPL2Q3MIP1 535 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 TFDP3Q5H9I0 405 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 MPP7Q5T2T1 576 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 ASTLQ6HA08 431 aaPredicted RBP14.53□□□□□ -0.08
SRSF6-202ENST00000483871 RFX6Q8HWS3 928 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 TP53INP2Q8IXH6 220 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 GJD3Q8N144 294 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 CPA6Q8N4T0 437 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 CSGALNACT1Q8TDX6 532 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 FAF2Q96CS3 445 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 NAPGQ99747 312 aaPredicted RBP14.53□□□□□ -0.08
SRSF6-202ENST00000483871 CATSPERBQ9H7T0 1116 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 TMEM248Q9NWD8 314 aa14.53□□□□□ -0.08
SRSF6-202ENST00000483871 hCG_1818297A0A087WSY0 165 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 TYW5A2RUC4 315 aaKnown RBP14.52□□□□□ -0.08
SRSF6-202ENST00000483871 CTAGE9A4FU28 777 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 ZNF185O15231 689 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 HOXC11O43248 304 aaPredicted RBP14.52□□□□□ -0.08
SRSF6-202ENST00000483871 LUC7L3O95232 432 aaKnown RBP14.52□□□□□ -0.08
SRSF6-202ENST00000483871 MAP3K6O95382 1288 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 OR1E1P30953 314 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 CASQ1P31415 396 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 DYNLT1P63172 113 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 NR1H3Q13133 447 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 TAZQ16635 292 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 MFN1Q8IWA4 741 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 RTL3Q8N8U3 475 aaKnown RBP14.52□□□□□ -0.08
SRSF6-202ENST00000483871 COG1Q8WTW3 980 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 UBE2Q2Q8WVN8 375 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 OSBPL9Q96SU4 736 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 MAK16Q9BXY0 300 aaKnown RBP14.52□□□□□ -0.08
SRSF6-202ENST00000483871 OSBPL8Q9BZF1 889 aa14.52□□□□□ -0.08
SRSF6-202ENST00000483871 RCOR3Q9P2K3 495 aaPredicted RBP14.52□□□□□ -0.08
SRSF6-202ENST00000483871 SAE1Q9UBE0 346 aaPredicted RBP14.52□□□□□ -0.08
SRSF6-202ENST00000483871 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.52□□□□□ -0.09
SRSF6-202ENST00000483871 A0A0D9SEW6 157 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 ESPNB1AK53 854 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 CLDN11O75508 207 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 SRFP11831 508 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 HLA-FP30511 346 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 HTR7P34969 479 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 OPRD1P41143 372 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 ZNF135P52742 658 aaPredicted RBP14.52□□□□□ -0.09
SRSF6-202ENST00000483871 ZNF177Q13360 481 aaPredicted RBP14.52□□□□□ -0.09
SRSF6-202ENST00000483871 TTC39BQ5VTQ0 682 aaPredicted RBP14.52□□□□□ -0.09
SRSF6-202ENST00000483871 PAPD7Q5XG87 772 aaKnown RBP14.52□□□□□ -0.09
SRSF6-202ENST00000483871 RNF43Q68DV7 783 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 NCBP2-AS2Q69YL0 99 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 CXorf57Q6NSI4 855 aaKnown RBP14.52□□□□□ -0.09
SRSF6-202ENST00000483871 NPNTQ6UXI9 565 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 CHST9Q7L1S5 443 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 ETFBKMTQ8IXQ9 262 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 CCDC33Q8N5R6 958 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 NPWQ8N729 165 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 PLD5Q8N7P1 536 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 ZNF592Q92610 1267 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 CELF6Q96J87 481 aaKnown RBP14.52□□□□□ -0.09
SRSF6-202ENST00000483871 MS4A14Q96JA4 679 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 KLC2Q9H0B6 622 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 CARD9Q9H257 536 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 FBRSL1Q9HCM7 1045 aaKnown RBP14.52□□□□□ -0.09
SRSF6-202ENST00000483871 SNX12Q9UMY4 172 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 DUSP12Q9UNI6 340 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 SORCS3Q9UPU3 1222 aa14.52□□□□□ -0.09
SRSF6-202ENST00000483871 COL4A3Q01955 1670 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 TCRBV7S2A1N4TA0A589 114 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 WASH4PA8MWX3 477 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 FGF10O15520 208 aaPredicted RBP14.51□□□□□ -0.09
SRSF6-202ENST00000483871 CEP104O60308 925 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 CACNG3O60359 315 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 CST8O60676 142 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 TULP3O75386 442 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 MZF1P28698 734 aaPredicted RBP14.51□□□□□ -0.09
SRSF6-202ENST00000483871 CD70P32970 193 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 COPS2P61201 443 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 SLC10A2Q12908 348 aaPredicted RBP14.51□□□□□ -0.09
SRSF6-202ENST00000483871 CDH18Q13634 790 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 PPP2R5EQ16537 467 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 TJAP1Q5JTD0 557 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 TXNDC11Q6PKC3 985 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 VSIG1Q86XK7 387 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 FIBINQ8TAL6 211 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.51□□□□□ -0.09
SRSF6-202ENST00000483871 XPO6Q96QU8 1125 aaKnown RBP14.51□□□□□ -0.09
SRSF6-202ENST00000483871 NOL6Q9H6R4 1146 aaKnown RBP14.51□□□□□ -0.09
SRSF6-202ENST00000483871 TRPV5Q9NQA5 729 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 SLC2A4RGQ9NR83 387 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 ABCB8Q9NUT2 735 aa14.51□□□□□ -0.09
SRSF6-202ENST00000483871 DNAJC17Q9NVM6 304 aaKnown RBP14.51□□□□□ -0.09
SRSF6-202ENST00000483871 SMARCAL1Q9NZC9 954 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms