RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ZNF513Q8N8E2 541 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 NAT16Q8N8M0 369 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 TERB1Q8NA31 727 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 IQUBQ8NA54 791 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 C2CD4AQ8NCU7 369 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 THAP3Q8WTV1 239 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 SMARCD1Q96GM5 515 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 DHRS1Q96LJ7 313 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 XPO6Q96QU8 1125 aaKnown RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 USP28Q96RU2 1077 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 MED10Q9BTT4 135 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 GTPBP2Q9BX10 602 aaKnown RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 B3GNT5Q9BYG0 378 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 TRIM9Q9C026 710 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 DPEP3Q9H4B8 488 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 ZSCAN16Q9H4T2 348 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 DMAP1Q9NPF5 467 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 SPHK2Q9NRA0 654 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 AGPAT3Q9NRZ7 376 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 COMMD8Q9NX08 183 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 CHORDC1Q9UHD1 332 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 LSM7Q9UK45 103 aaKnown RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 PILRBQ9UKJ0 227 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 WASF3Q9UPY6 502 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 NEUROG3Q9Y4Z2 214 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 GREB1Q4ZG55 1949 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 FAM208BQ5VWN6 2430 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 UBE4BO95155 1302 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 ATXN2Q99700 1313 aaKnown RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 RALGAPA1Q6GYQ0 2036 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 KIF26AQ9ULI4 1882 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 F8W735 103 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 CLIC2O15247 247 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SPTLC2O15270 562 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 TGFB1I1O43294 461 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 HYAL3O43820 417 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 EXOC3O60645 756 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 TOP3BO95985 862 aaKnown RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SERPINF2P08697 491 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 IRF1P10914 325 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 P4HA1P13674 534 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 GNSP15586 552 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 NTSR1P30989 418 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 ASPAP45381 313 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 AP3M2P53677 418 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SLC5A3P53794 718 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 CACNA2D1P54289 1103 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 MYL6P60660 151 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SIM1P81133 766 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SLC7A5Q01650 507 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 ZNF33AQ06730 810 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 MESP2Q0VG99 397 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SEMA3BQ13214 749 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 ZNF699Q32M78 642 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 ZNF667Q5HYK9 610 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SYCP2LQ5T4T6 812 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SNX30Q5VWJ9 437 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 GRAMD4Q6IC98 578 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 KIAA1211LQ6NV74 962 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 FDX2Q6P4F2 183 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 UNC13DQ70J99 1090 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SPATC1Q76KD6 591 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 EPM2AIP1Q7L775 607 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 BBS7Q8IWZ6 715 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 NELFCDQ8IXH7 590 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 PHACTR4Q8IZ21 702 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 CHPFQ8IZ52 775 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 Q8N3U1 123 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 FRMD1Q8N878 549 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SCAMP5Q8TAC9 235 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 GOLGA5Q8TBA6 731 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SCFD1Q8WVM8 642 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 ZCCHC14Q8WYQ9 949 aaKnown RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 GATA6Q92908 595 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 HPS3Q969F9 1004 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 ISL2Q96A47 359 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 DHX58Q96C10 678 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 CCDC74BQ96LY2 380 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 KCNK16Q96T55 309 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 EPN3Q9H201 632 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 FBXO44Q9H4M3 255 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 MAGEF1Q9HAY2 307 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 ZDHHC4Q9NPG8 344 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 TLR8Q9NR97 1041 aaKnown RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 TMEM74BQ9NUR3 256 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 DNAJC17Q9NVM6 304 aaKnown RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 NOP53Q9NZM5 478 aaKnown RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 CALCOCO1Q9P1Z2 691 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 CGNQ9P2M7 1197 aaKnown RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 SUSD2Q9UGT4 822 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 MBD1Q9UIS9 605 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-207ENST00000483407 PCDHB10Q9UN67 800 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 NME7Q9Y5B8 376 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 ACTL7BQ9Y614 415 aa6.19□□□□□ -1.42
CSDE1-207ENST00000483407 IGHV1OR15-9A0A0B4J2B8 117 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 SPAARA0A1B0GVQ0 90 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 A0A1W2PQD8 194 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 FAM92AA1XBS5 289 aa6.18□□□□□ -1.42
CSDE1-207ENST00000483407 SRRM3A6NNA2 597 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms