RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 GSTM5P46439 218 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 SRSF1Q07955 248 aaKnown RBP eCLIP4.22□□□□□ -1.73
GTF3A-207ENST00000482655 MTA1Q13330 715 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 PRKG1Q13976 671 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 KCNJ12Q14500 433 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 PFKFB4Q16877 469 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 ALFQ53S48 1182 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 ARL6IP4Q66PJ3 421 aaKnown RBP4.22□□□□□ -1.73
GTF3A-207ENST00000482655 ANKRD18AQ8IVF6 992 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 ATG16L2Q8NAA4 619 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 TRAPPC12Q8WVT3 735 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 AKAP1Q92667 903 aaKnown RBP eCLIP4.22□□□□□ -1.73
GTF3A-207ENST00000482655 TRMT61AQ96FX7 289 aaKnown RBP4.22□□□□□ -1.73
GTF3A-207ENST00000482655 WDR24Q96S15 920 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 SENP7Q9BQF6 1050 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 TM2D2Q9BX73 214 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.22□□□□□ -1.73
GTF3A-207ENST00000482655 NECTIN3Q9NQS3 549 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 TMEM45AQ9NWC5 275 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 SQORQ9Y6N5 450 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 DIP2AQ14689 1571 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 TET3O43151 1660 aa4.22□□□□□ -1.73
GTF3A-207ENST00000482655 FAM234BA2RU67 622 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 C2CD4BA6NLJ0 364 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 NDST3O95803 873 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 MBPP02686 304 aaPredicted RBP4.21□□□□□ -1.74
GTF3A-207ENST00000482655 PSG1P11464 419 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 HOXB6P17509 224 aaKnown RBP4.21□□□□□ -1.74
GTF3A-207ENST00000482655 MMP8P22894 467 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 RPS6KB1P23443 525 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 FOXG1P55316 489 aaPredicted RBP4.21□□□□□ -1.74
GTF3A-207ENST00000482655 PPFIA1Q13136 1202 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 SEMA3BQ13214 749 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 P3H1Q32P28 736 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 TUBB8Q3ZCM7 444 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 TMEM196Q5HYL7 178 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.21□□□□□ -1.74
GTF3A-207ENST00000482655 CCDC70Q6NSX1 233 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 LDHAL6AQ6ZMR3 332 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 ZNF517Q6ZMY9 492 aaPredicted RBP4.21□□□□□ -1.74
GTF3A-207ENST00000482655 FAM57BQ71RH2 274 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 GATAD2AQ86YP4 633 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 CCDC28AQ8IWP9 274 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 VCPIP1Q96JH7 1222 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 ZFYVE19Q96K21 471 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 OBP2BQ9NPH6 170 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 ASNSD1Q9NWL6 643 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 DACT1Q9NYF0 836 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 RGL1Q9NZL6 768 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 SEMA5BQ9P283 1151 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 NLRP1Q9C000 1473 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 MAST1Q9Y2H9 1570 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 PHLPP1O60346 1717 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 SLIT1O75093 1534 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 KDM5DQ9BY66 1539 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 RGS12O14924 1447 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 KIAA1107Q9UPP5 1409 aa4.21□□□□□ -1.74
GTF3A-207ENST00000482655 SPAG9O60271 1321 aaKnown RBP4.21□□□□□ -1.74
GTF3A-207ENST00000482655 SRCAPQ6ZRS2 3230 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 TMEM94Q12767 1356 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 DHX29Q7Z478 1369 aaKnown RBP4.2□□□□□ -1.74
GTF3A-207ENST00000482655 SLC22A23A1A5C7 686 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 F8W810 466 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 SYT5O00445 386 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 IRAK2O43187 625 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 WDHD1O75717 1129 aaPredicted RBP4.2□□□□□ -1.74
GTF3A-207ENST00000482655 OAZ2O95190 189 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 ST6GAL1P15907 406 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 NDUFS1P28331 727 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 PDIA3P30101 505 aaKnown RBP4.2□□□□□ -1.74
GTF3A-207ENST00000482655 POLE2P56282 527 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 MTX1Q13505 466 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 FHL3Q13643 280 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 SPARCL1Q14515 664 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 RAB30Q15771 203 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 GLE1Q53GS7 698 aaKnown RBP4.2□□□□□ -1.74
GTF3A-207ENST00000482655 RBM44Q6ZP01 1051 aaKnown RBP4.2□□□□□ -1.74
GTF3A-207ENST00000482655 COLCA1Q6ZS62 124 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 TFAP2DQ7Z6R9 452 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 PIP4P1Q86T03 277 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 TTC30AQ86WT1 665 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 CACNA2D3Q8IZS8 1091 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 CLASRPQ8N2M8 674 aaKnown RBP4.2□□□□□ -1.74
GTF3A-207ENST00000482655 ZNF548Q8NEK5 533 aaPredicted RBP4.2□□□□□ -1.74
GTF3A-207ENST00000482655 OR52L2PQ8NGH6 319 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 BCAS4Q8TDM0 211 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 OVCA2Q8WZ82 227 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 GCC1Q96CN9 775 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 TUBB6Q9BUF5 446 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 TRIM2Q9C040 744 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 PCDHAC1Q9H158 963 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 ANAPC4Q9UJX5 808 aa4.2□□□□□ -1.74
GTF3A-207ENST00000482655 ZMYND8Q9ULU4 1186 aaPredicted RBP4.2□□□□□ -1.74
GTF3A-207ENST00000482655 NWD1Q149M9 1564 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 ERVK-7P63135 1459 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 SCAF11Q99590 1463 aaKnown RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.19□□□□□ -1.74
GTF3A-207ENST00000482655 CD8B2A6NJW9 211 aa4.19□□□□□ -1.74
GTF3A-207ENST00000482655 LGALS16A8MUM7 142 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms