RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 IL27RAQ6UWB1 636 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 FAM83HQ6ZRV2 1179 aaPredicted RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 LRRC55Q6ZSA7 311 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 ARHGEF18Q6ZSZ5 1173 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 RRM2BQ7LG56 351 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 DTX2Q86UW9 622 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 TAX1BP1Q86VP1 789 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 D2HGDHQ8N465 521 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 PLD5Q8N7P1 536 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 AVL9Q8NBF6 648 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 OR52L2PQ8NGH6 319 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 GLMPQ8WWB7 406 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 SOCS4Q8WXH5 440 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 RAB40AQ8WXH6 277 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 POMGNT1Q8WZA1 660 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 CNOT9Q92600 299 aaKnown RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 MIEF2Q96C03 454 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 ZNF764Q96H86 408 aaPredicted RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 PRR11Q96HE9 360 aaPredicted RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 KLHL15Q96M94 604 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 JAKMIP1Q96N16 626 aaKnown RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 OR14A2Q96R54 314 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 NDST4Q9H3R1 872 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 EPHX3Q9H6B9 360 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 TTC12Q9H892 705 aaPredicted RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 SAP30LQ9HAJ7 183 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 SLC22A11Q9NSA0 550 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 ABCF3Q9NUQ8 709 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 MTMR4Q9NYA4 1195 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 MRPL15Q9P015 296 aaKnown RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 SUCLA2Q9P2R7 463 aaPredicted RBP5.69□□□□□ -1.5
COPA-203ENST00000481040 KLQ9UEF7 1012 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 SNX5Q9Y5X3 404 aa5.69□□□□□ -1.5
COPA-203ENST00000481040 CSPG5O95196 566 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 C1SP09871 688 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 ZNF37AP17032 561 aaPredicted RBP5.68□□□□□ -1.5
COPA-203ENST00000481040 TBXAS1P24557 533 aaPredicted RBP5.68□□□□□ -1.5
COPA-203ENST00000481040 RABGGTBP53611 331 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 CXADRP78310 365 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 PRAMEP78395 509 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 PPARDQ03181 441 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 DEUP1Q05D60 604 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 EIF2B5Q13144 721 aaKnown RBP5.68□□□□□ -1.5
COPA-203ENST00000481040 DNASE1L3Q13609 305 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 ALKBH1Q13686 389 aaKnown RBP5.68□□□□□ -1.5
COPA-203ENST00000481040 NAIF1Q69YI7 327 aaPredicted RBP5.68□□□□□ -1.5
COPA-203ENST00000481040 TMEM154Q6P9G4 183 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 CHST9Q7L1S5 443 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 DNAJB7Q7Z6W7 309 aaPredicted RBP5.68□□□□□ -1.5
COPA-203ENST00000481040 GSPT2Q8IYD1 628 aaKnown RBP5.68□□□□□ -1.5
COPA-203ENST00000481040 CNPY4Q8N129 248 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 TMEM132CQ8N3T6 1108 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 TMEM116Q8NCL8 245 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 BEND2Q8NDZ0 799 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 CTHRC1Q96CG8 243 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 DCLRE1CQ96SD1 692 aaKnown RBP5.68□□□□□ -1.5
COPA-203ENST00000481040 DESI2Q9BSY9 194 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 CDCP1Q9H5V8 836 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 CDH22Q9UJ99 828 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 ADAM18Q9Y3Q7 739 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 KCTD3Q9Y597 815 aa5.68□□□□□ -1.5
COPA-203ENST00000481040 MUSKO15146 869 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 TRIM24O15164 1050 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 TP73O15350 636 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 TBX10O75333 385 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 PMPCBO75439 489 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 RPS6KA4O75676 772 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 OR2C1O95371 312 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 CREB1P16220 341 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 MCM3P25205 808 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 CALRP27797 417 aaKnown RBP5.67□□□□□ -1.5
COPA-203ENST00000481040 GKP32189 559 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 TTKP33981 857 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 CPOXP36551 454 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 LIPAP38571 399 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 MTNR1AP48039 350 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 RPS6KA3P51812 740 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 CDH8P55286 799 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 PPP2CBP62714 309 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 PPP2CAP67775 309 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 GOLGA8DPQ0D2H9 430 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 FOXL1Q12952 345 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 BYSLQ13895 437 aaKnown RBP5.67□□□□□ -1.5
COPA-203ENST00000481040 CYP2A13Q16696 494 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 ZNF667Q5HYK9 610 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 ZNF362Q5T0B9 420 aaPredicted RBP5.67□□□□□ -1.5
COPA-203ENST00000481040 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 B3GNTL1Q67FW5 361 aaPredicted RBP5.67□□□□□ -1.5
COPA-203ENST00000481040 NAPEPLDQ6IQ20 393 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 TMEM81Q6P7N7 255 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 SARM1Q6SZW1 724 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 MFSD6Q6ZSS7 791 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 DENND5BQ6ZUT9 1274 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 SLFN11Q7Z7L1 901 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 IQCA1Q86XH1 822 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 SCN4BQ8IWT1 228 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 GPR150Q8NGU9 434 aa5.67□□□□□ -1.5
COPA-203ENST00000481040 GOT1L1Q8NHS2 421 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms