RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 FUT11Q495W5 492 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 TAF3Q5VWG9 929 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 VSTM1Q6UX27 236 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 DENND5BQ6ZUT9 1274 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 LIMS2Q7Z4I7 341 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 VPS36Q86VN1 386 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 FAM71AQ8IYT1 594 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 UBR7Q8N806 425 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 SLC4A11Q8NBS3 891 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 MKRN2Q9H000 416 aaKnown RBP15.11■□□□□ 0.01
USP11-207ENST00000478596 DEF6Q9H4E7 631 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 KRT82Q9NSB4 513 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 IMPACTQ9P2X3 320 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 SLCO1B1Q9Y6L6 691 aa15.11■□□□□ 0.01
USP11-207ENST00000478596 NOTCH2Q04721 2471 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 PRRT4C9JH25 899 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 NRDCO43847 1150 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 CALCAP01258 141 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 VDRP11473 427 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 GP1BBP13224 206 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 ANXA13P27216 316 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 GRIK1P39086 918 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 ZNF132P52740 706 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 GSDMDP57764 484 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 VAC14Q08AM6 782 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 STARD3Q14849 445 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 CCDC142Q17RM4 750 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 ANO4Q32M45 955 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 DPY19L2P1Q6NXN4 242 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 ZNF574Q6ZN55 896 aaPredicted RBP15.1■□□□□ 0.01
USP11-207ENST00000478596 FAM35AQ86V20 835 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 SLC47A2Q86VL8 602 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 TMEM25Q86YD3 366 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 SLC2A14Q8TDB8 520 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 CNDP2Q96KP4 475 aaKnown RBP15.1■□□□□ 0.01
USP11-207ENST00000478596 ABHD10Q9NUJ1 306 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 DNAJC17Q9NVM6 304 aaKnown RBP15.1■□□□□ 0.01
USP11-207ENST00000478596 KNL1Q8NG31 2342 aa15.1■□□□□ 0.01
USP11-207ENST00000478596 KCNK3O14649 394 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 CACNG3O60359 315 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 AP1G2O75843 785 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 LDOC1O95751 146 aaPredicted RBP15.09■□□□□ 0.01
USP11-207ENST00000478596 FAM200BP0CF97 657 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 MBL2P11226 248 aaPredicted RBP15.09■□□□□ 0.01
USP11-207ENST00000478596 CTSKP43235 329 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 DNAJC3Q13217 504 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 ILKQ13418 452 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 STILQ15468 1287 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 FAM171BQ6P995 826 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 PASD1Q8IV76 773 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 C12orf29Q8N999 325 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 OR8K1Q8NGG5 319 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 MYCBPAPQ8TBZ2 947 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 RFFLQ8WZ73 363 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 TSC1Q92574 1164 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 SMARCD1Q96GM5 515 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 PCED1BQ96HM7 432 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 ZNF578Q96N58 590 aaPredicted RBP15.09■□□□□ 0.01
USP11-207ENST00000478596 TRIM4Q9C037 500 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 TM9SF3Q9HD45 589 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 CRTAC1Q9NQ79 661 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 KIAA1257Q9ULG3 409 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 NME7Q9Y5B8 376 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 HEMK1Q9Y5R4 338 aaPredicted RBP15.09■□□□□ 0.01
USP11-207ENST00000478596 LRRK2Q5S007 2527 aa15.09■□□□□ 0.01
USP11-207ENST00000478596 DOPEY2Q9Y3R5 2298 aa15.08■□□□□ 0
USP11-207ENST00000478596 WASH3PC4AMC7 463 aa15.08■□□□□ 0
USP11-207ENST00000478596 RNF225M0QZC1 329 aaPredicted RBP15.08■□□□□ 0
USP11-207ENST00000478596 CLDN5O00501 218 aa15.08■□□□□ 0
USP11-207ENST00000478596 CYP11B1P15538 503 aa15.08■□□□□ 0
USP11-207ENST00000478596 BCAT1P54687 386 aa15.08■□□□□ 0
USP11-207ENST00000478596 IL9RQ01113 521 aa15.08■□□□□ 0
USP11-207ENST00000478596 BBS7Q8IWZ6 715 aa15.08■□□□□ 0
USP11-207ENST00000478596 DCBLD1Q8N8Z6 715 aa15.08■□□□□ 0
USP11-207ENST00000478596 SLC20A1Q8WUM9 679 aa15.08■□□□□ 0
USP11-207ENST00000478596 CYFIP2Q96F07 1278 aa15.08■□□□□ 0
USP11-207ENST00000478596 SIPA1Q96FS4 1042 aa15.08■□□□□ 0
USP11-207ENST00000478596 NAF1Q96HR8 494 aaKnown RBP15.08■□□□□ 0
USP11-207ENST00000478596 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.08■□□□□ 0
USP11-207ENST00000478596 FAM117AQ9C073 453 aa15.08■□□□□ 0
USP11-207ENST00000478596 ZNF518BQ9C0D4 1074 aa15.08■□□□□ 0
USP11-207ENST00000478596 ACP6Q9NPH0 428 aa15.08■□□□□ 0
USP11-207ENST00000478596 TSPAN16Q9UKR8 245 aa15.08■□□□□ 0
USP11-207ENST00000478596 SSUH2Q9Y2M2 353 aa15.08■□□□□ 0
USP11-207ENST00000478596 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.08■□□□□ 0
USP11-207ENST00000478596 STON1Q9Y6Q2 735 aa15.08■□□□□ 0
USP11-207ENST00000478596 BOD1L1Q8NFC6 3051 aa15.07■□□□□ 0
USP11-207ENST00000478596 A0A1B0GTQ1 180 aa15.07■□□□□ 0
USP11-207ENST00000478596 FAM170AA1A519 330 aa15.07■□□□□ 0
USP11-207ENST00000478596 CBX4O00257 560 aa15.07■□□□□ 0
USP11-207ENST00000478596 SERPING1P05155 500 aa15.07■□□□□ 0
USP11-207ENST00000478596 GLDCP23378 1020 aa15.07■□□□□ 0
USP11-207ENST00000478596 BDNFP23560 247 aa15.07■□□□□ 0
USP11-207ENST00000478596 CLCN1P35523 988 aa15.07■□□□□ 0
USP11-207ENST00000478596 TBX2Q13207 712 aaPredicted RBP15.07■□□□□ 0
USP11-207ENST00000478596 KCNT1Q5JUK3 1230 aa15.07■□□□□ 0
USP11-207ENST00000478596 PPP1R26Q5T8A7 1209 aaPredicted RBP15.07■□□□□ 0
USP11-207ENST00000478596 NOP9Q86U38 636 aaKnown RBP15.07■□□□□ 0
USP11-207ENST00000478596 TMPRSS6Q8IU80 811 aa15.07■□□□□ 0
USP11-207ENST00000478596 CRYBG2Q8N1P7 616 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms