RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 Q6ZS52 159 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 NLRP14Q86W24 1093 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 REXO1L1PQ8IX06 675 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 LRRC57Q8N9N7 239 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 FIBINQ8TAL6 211 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 SORCS1Q8WY21 1168 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 RAPGEF5Q92565 580 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 SHDQ96IW2 340 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 MFSD1Q9H3U5 465 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 PCDH18Q9HCL0 1135 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.35■□□□□ 0.21
COPS3-207ENST00000477299 CAPN6Q9Y6Q1 641 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 CACNA1IQ9P0X4 2223 aa16.35■□□□□ 0.21
COPS3-207ENST00000477299 A0A0A0MRY4 1105 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 A0A1B0GVM2 712 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 TBC1D3BA6NDS4 549 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 TCAF2A6NFQ2 919 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 USP27XA6NNY8 438 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 PALMO75781 387 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 DESP17661 470 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 AMPD1P23109 780 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 CSKP41240 450 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 POLNQ7Z5Q5 900 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 KIAA0907Q7Z7F0 614 aaPredicted RBP16.34■□□□□ 0.21
COPS3-207ENST00000477299 DAAM2Q86T65 1068 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 ADIPOR2Q86V24 386 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 TP53INP2Q8IXH6 220 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 TERB1Q8NA31 727 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 PJA1Q8NG27 643 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 KRT35Q92764 455 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 TBC1D31Q96DN5 1066 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 ERLEC1Q96DZ1 483 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 ACOX2Q99424 681 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 ZYG11BQ9C0D3 744 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 ETNK2Q9NVF9 386 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 DNAI1Q9UI46 699 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 PACSIN2Q9UNF0 486 aaPredicted RBP16.34■□□□□ 0.21
COPS3-207ENST00000477299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
COPS3-207ENST00000477299 ZDBF2Q9HCK1 2354 aa16.34■□□□□ 0.21
COPS3-207ENST00000477299 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 A0A0D9SEW6 157 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 EEF2KO00418 725 aaKnown RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 SPOPO43791 374 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 APODP05090 189 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 EPHB2P29323 1055 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 EIF2DP41214 584 aaKnown RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 GRIA2P42262 883 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 CTSOP43234 321 aaPredicted RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 AIF1P55008 147 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 CDH4P55283 916 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 CDH6P55285 790 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 AMPD2Q01433 879 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 ZNF177Q13360 481 aaPredicted RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 LLGL1Q15334 1064 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 DPYSL2Q16555 572 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 HADHQ16836 314 aaKnown RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 FUT11Q495W5 492 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 C2orf27AQ580R0 203 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 RNF219Q5W0B1 726 aaPredicted RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 C11orf63Q6NUN7 778 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 CHST9Q7L1S5 443 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 TMEM105Q8N8V8 129 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 OR7D4Q8NG98 312 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 TEKT4Q8WW24 435 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 TSC1Q92574 1164 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 ALG14Q96F25 216 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 NCAPGQ9BPX3 1015 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 SLC2A11Q9BYW1 496 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 NOL6Q9H6R4 1146 aaKnown RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 TMEM51Q9NW97 253 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 TRMT1Q9NXH9 659 aaKnown RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 DLGAP2Q9P1A6 1054 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 PPARGC1AQ9UBK2 798 aaKnown RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 GGA2Q9UJY4 613 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 TBC1D30Q9Y2I9 924 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 SLC27A6Q9Y2P4 619 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 SIT1Q9Y3P8 196 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 OR51B4Q9Y5P0 310 aa16.33■□□□□ 0.2
COPS3-207ENST00000477299 MUC22E2RYF6 1773 aaPredicted RBP16.33■□□□□ 0.2
COPS3-207ENST00000477299 C3orf70A6NLC5 250 aaPredicted RBP16.32■□□□□ 0.2
COPS3-207ENST00000477299 WASH3PC4AMC7 463 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 RNF40O75150 1001 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 CLDN11O75508 207 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 FTCDO95954 541 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 PABPC1P11940 636 aaKnown RBP16.32■□□□□ 0.2
COPS3-207ENST00000477299 RHOQP17081 205 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 DRD1P21728 446 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 GLDCP23378 1020 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 KDELR1P24390 212 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 TPI1P60174 286 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 GRSF1Q12849 480 aaKnown RBP eCLIP16.32■□□□□ 0.2
COPS3-207ENST00000477299 MTA1Q13330 715 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 CDH18Q13634 790 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 DPYSQ14117 519 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 DPYSL3Q14195 570 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 EGFLAMQ63HQ2 1017 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 NT5DC3Q86UY8 548 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.32■□□□□ 0.2
COPS3-207ENST00000477299 FAM71BQ8TC56 605 aa16.32■□□□□ 0.2
COPS3-207ENST00000477299 KIAA1524Q8TCG1 905 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms