RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 CTXN3Q4LDR2 81 aa13.74□□□□□ -0.21
HDAC7-221ENST00000477203 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
HDAC7-221ENST00000477203 LRRC6Q86X45 466 aa13.74□□□□□ -0.21
HDAC7-221ENST00000477203 NT5C3BQ969T7 300 aa13.74□□□□□ -0.21
HDAC7-221ENST00000477203 SIGLEC10Q96LC7 697 aa13.74□□□□□ -0.21
HDAC7-221ENST00000477203 NSRP1Q9H0G5 558 aaKnown RBP13.74□□□□□ -0.21
HDAC7-221ENST00000477203 UNC93B1Q9H1C4 597 aa13.74□□□□□ -0.21
HDAC7-221ENST00000477203 ZNF395Q9H8N7 513 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-221ENST00000477203 SNX3O60493 162 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 DGKIO75912 1065 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 STK10O94804 968 aaKnown RBP13.73□□□□□ -0.21
HDAC7-221ENST00000477203 NR2C2P49116 596 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 LAMB3Q13751 1172 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 DPYSQ14117 519 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 TCTN1Q2MV58 587 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 PRSS55Q6UWB4 352 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-221ENST00000477203 TRIM74Q86UV6 250 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 TRIM73Q86UV7 250 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 CIR1Q86X95 450 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-221ENST00000477203 SLC24A2Q9UI40 661 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 VANGL2Q9ULK5 521 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 PSAT1Q9Y617 370 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 RPS6KL1Q9Y6S9 549 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 A8MUI8 341 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 PAGE1O75459 146 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 GCATO75600 419 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 PDHA1P08559 390 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 VEGFBP49765 207 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
HDAC7-221ENST00000477203 CERCAMQ5T4B2 595 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 CGB2Q6NT52 195 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 C16orf46Q6P387 395 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 FAM171BQ6P995 826 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 ADGRD1Q6QNK2 874 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 MAB21L3Q8N8X9 362 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 URGCPQ8TCY9 931 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 PTPRN2Q92932 1015 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 OLFM3Q96PB7 478 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 TSC22D3Q99576 134 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 EPAS1Q99814 870 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 IQCGQ9H095 443 aaKnown RBP13.73□□□□□ -0.21
HDAC7-221ENST00000477203 PIDD1Q9HB75 910 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 CYLDQ9NQC7 956 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 LRFN2Q9ULH4 789 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 TRIM33Q9UPN9 1127 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 DCLK1O15075 740 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 SMNDC1O75940 238 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■□□□ 12.6
HDAC7-221ENST00000477203 ASMTLO95671 621 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 MT-CYBP00156 380 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-221ENST00000477203 NFKB1P19838 968 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 PTPN3P26045 913 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 TAS1R1Q7RTX1 841 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 C14orf80Q86SX3 495 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 KIF2BQ8N4N8 673 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 NPHS2Q9NP85 383 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 ACSS2Q9NR19 701 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 GMIPQ9P107 970 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 PHTF1Q9UMS5 762 aa13.73□□□□□ -0.21
HDAC7-221ENST00000477203 MGRN1O60291 552 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 UBOX5O94941 541 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 APOEP02649 317 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 TBC1D25Q3MII6 688 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 RAB41Q5JT25 222 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 SCD5Q86SK9 330 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 FCRL2Q96LA5 508 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-221ENST00000477203 EBNA1BP2Q99848 306 aaKnown RBP13.72□□□□□ -0.21
HDAC7-221ENST00000477203 PAPOLBQ9NRJ5 636 aaKnown RBP13.72□□□□□ -0.21
HDAC7-221ENST00000477203 MARCOQ9UEW3 520 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-221ENST00000477203 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-221ENST00000477203 SCN5AQ14524 2016 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 C5orf60A6NFR6 353 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 TBKBP1A7MCY6 615 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 KITP10721 976 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 BGNP21810 368 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 PCSK7Q16549 785 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 TRAF7Q6Q0C0 670 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 SLC44A1Q8WWI5 657 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 MAGEB18Q96M61 343 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 OSBPL1AQ9BXW6 950 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 UNKQ9C0B0 810 aaKnown RBP13.72□□□□□ -0.21
HDAC7-221ENST00000477203 CRISPLD1Q9H336 500 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 RGS18Q9NS28 235 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-221ENST00000477203 CHD7Q9P2D1 2997 aa13.72□□□□□ -0.21
HDAC7-221ENST00000477203 CEP290O15078 2479 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 IQANK1A0A1B0GTG1 560 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 CCT8L1PA6NM43 557 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 RSPO2Q6UXX9 243 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-221ENST00000477203 ZCCHC23Q6ZST2 131 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 PIGWQ7Z7B1 504 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 ZNF669Q96BR6 464 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-221ENST00000477203 BATF3Q9NR55 127 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 M0QZQ0 153 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 TYROBPO43914 113 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 PMPCBO75439 489 aa13.71□□□□□ -0.21
HDAC7-221ENST00000477203 LINGO3P0C6S8 592 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms