RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MMP8P22894 467 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CDKN2BP42772 138 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CCNA1P78396 465 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CDK16Q00536 496 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 DSG1Q02413 1049 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PDAP1Q13442 181 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 BMT2Q1RMZ1 405 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 EFHC2Q5JST6 749 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 C6orf52Q5T4I8 152 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MOXD1Q6UVY6 613 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 BTNL9Q6UXG8 535 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TMPRSS6Q8IU80 811 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SLC41A1Q8IVJ1 513 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 C1orf127Q8N9H9 656 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 RMDN1Q96DB5 314 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 BORCS6Q96GS4 357 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 KCNK16Q96T55 309 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MIPEPQ99797 713 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TINF2Q9BSI4 451 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PLEKHA5Q9HAU0 1116 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CDHR5Q9HBB8 845 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 DMAC2Q9NW81 257 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 LNPEPQ9UIQ6 1025 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 FAM50BQ9Y247 325 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 NUP205Q92621 2012 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CACNA1CQ13936 2221 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 NID2Q14112 1375 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 FER1L6Q2WGJ9 1857 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 HNRNPRO43390 633 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SH3BP5O60239 455 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 KATNA1O75449 491 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PIGNO95427 931 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ASMTLO95671 621 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SNAI1O95863 264 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 LTFP02788 710 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 C4BPAP04003 597 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TPBGLP0DKB5 382 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 UNGP13051 313 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 EN2P19622 333 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 NAMPTP43490 491 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 CHRNA4P43681 627 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ACVR2BQ13705 512 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PPP1R15BQ5SWA1 713 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ENOSF1Q7L5Y1 443 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TLK2Q86UE8 772 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 EXOC8Q8IYI6 725 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ULK2Q8IYT8 1036 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PHTF2Q8N3S3 785 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 OR10Q1Q8NGQ4 319 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 RIN3Q8TB24 985 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MAML3Q96JK9 1138 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TBCBQ99426 244 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 EIF2AQ9BY44 585 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PCDHAC1Q9H158 963 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 VPS33BQ9H267 617 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 CYLDQ9NQC7 956 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 DDX56Q9NY93 547 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 RABGEF1Q9UJ41 708 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 BTRCQ9Y297 605 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TDRKHQ9Y2W6 561 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 HEMK1Q9Y5R4 338 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 F5P12259 2224 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ROBO3Q96MS0 1386 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MEIS3P2A8K0S8 358 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TREHO43280 583 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 NOL3O60936 208 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ABCB1P08183 1280 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 CPA3P15088 417 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ARF4P18085 180 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 GRIK1P39086 918 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ABL2P42684 1182 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SCNN1BP51168 640 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TKTL1P51854 596 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 AQP4P55087 323 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SLC34A1Q06495 639 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 CCDC15Q0P6D6 951 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ATP1A4Q13733 1029 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MAP7Q14244 749 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TTLL4Q14679 1199 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MAPK11Q15759 364 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 NEDD8Q15843 81 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 DCAF4L1Q3SXM0 396 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 AGKQ53H12 422 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 RNASEH2BQ5TBB1 312 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MPZL3Q6UWV2 235 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 CHST15Q7LFX5 561 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SATL1Q86VE3 508 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MYO1HQ8N1T3 1032 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TDRD5Q8NAT2 981 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PSD4Q8NDX1 1056 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TFB1MQ8WVM0 346 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 GRAMD1AQ96CP6 724 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 RCN3Q96D15 328 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 APOPT1Q96IL0 206 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PEBP4Q96S96 227 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TMEM216Q9P0N5 145 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SFMBT1Q9UHJ3 866 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 DTNAQ9Y4J8 743 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 NT5C1B-RDH14C9J2C7 533 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 H3BRB1 525 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms