RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 LAYNQ6UX15 382 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 USP30Q70CQ3 517 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 TMPRSS7Q7RTY8 843 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 PPM1KQ8N3J5 372 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 HJURPQ8NCD3 748 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 ENGASEQ8NFI3 743 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 FIBINQ8TAL6 211 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 ERCC4Q92889 916 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 KAT5Q92993 513 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 SMARCE1Q969G3 411 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 IGSF8Q969P0 613 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 FCRL2Q96LA5 508 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 PRICKLE1Q96MT3 831 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 CEP63Q96MT8 703 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 DDX50Q9BQ39 737 aaKnown RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 ORAI3Q9BRQ5 295 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 TMUB1Q9BVT8 246 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 RSPH9Q9H1X1 276 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 PABPC3Q9H361 631 aaKnown RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 MTG2Q9H4K7 406 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 CCDC86Q9H6F5 360 aaKnown RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 STIM2Q9P246 746 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 SCML1Q9UN30 329 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 BTBD3Q9Y2F9 522 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 GPSM3Q9Y4H4 160 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 DSPP15924 2871 aaKnown RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 ASXL3Q9C0F0 2248 aa7.47□□□□□ -1.21
UBE4B-208ENST00000475795 TDRD6O60522 2096 aaKnown RBP7.47□□□□□ -1.21
UBE4B-208ENST00000475795 SHROOM3Q8TF72 1996 aa7.46□□□□□ -1.21
UBE4B-208ENST00000475795 CELSR3Q9NYQ7 3312 aa7.46□□□□□ -1.21
UBE4B-208ENST00000475795 GOLGA6L4A6NEF3 574 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 H0Y8X5 98 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 P4HA2O15460 535 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 TNFSF14O43557 240 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 SIN3BO75182 1162 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 LUC7L3O95232 432 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 CALCAP01258 141 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 FYNP06241 537 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 IGHV4-34P06331 123 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 GGCXP38435 758 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 CTSKP43235 329 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 GRK6P43250 576 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 RPL34P49207 117 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 ST8SIA6P61647 398 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 RPS24P62847 133 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 GCNT1Q02742 428 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 GUCA2AQ02747 115 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 CETN1Q12798 172 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 STIM1Q13586 685 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 CDH18Q13634 790 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 COL9A2Q14055 689 aaPredicted RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 ARID5BQ14865 1188 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 HNRNPA1L2Q32P51 320 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 CCDC40Q4G0X9 1142 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 MS4A13Q5J8X5 152 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 PITRM1Q5JRX3 1037 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 KCNT1Q5JUK3 1230 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 KIAA0895LQ68EN5 471 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 ADAT2Q7Z6V5 191 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 DHX40Q8IX18 779 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 SCUBE3Q8IX30 993 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 CARNMT1Q8N4J0 409 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 KDM1BQ8NB78 822 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 LMO3Q8TAP4 145 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 MDM1Q8TC05 714 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 DQX1Q8TE96 717 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 MYEOVQ96EZ4 313 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 SLC39A13Q96H72 371 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 DHTKD1Q96HY7 919 aaPredicted RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 MRGPRX3Q96LB0 322 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 TIGD1Q96MW7 591 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 SERPINB11Q96P15 392 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 MIS12Q9H081 205 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 NUCKS1Q9H1E3 243 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 FBXL12Q9NXK8 326 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 SERGEFQ9UGK8 458 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 HOOK1Q9UJC3 728 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 INTS6Q9UL03 887 aaKnown RBP7.46□□□□□ -1.22
UBE4B-208ENST00000475795 NCKAP1Q9Y2A7 1128 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 TLR6Q9Y2C9 796 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 ITIH6Q6UXX5 1313 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 DOCK4Q8N1I0 1966 aa7.46□□□□□ -1.22
UBE4B-208ENST00000475795 EDDM13A0A1B0GTR0 161 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 A0A1W2PP55 124 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 A0A1W2PPC4 97 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 TARSL2A2RTX5 802 aaKnown RBP7.45□□□□□ -1.22
UBE4B-208ENST00000475795 C10orf142B7Z368 130 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 KCNK3O14649 394 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 VILLO15195 856 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 MID1O15344 667 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 SART1O43290 800 aaKnown RBP7.45□□□□□ -1.22
UBE4B-208ENST00000475795 DFNA5O60443 496 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 RNASEH1O60930 286 aaKnown RBP7.45□□□□□ -1.22
UBE4B-208ENST00000475795 MOCS2O96007 188 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-208ENST00000475795 SRPRAP08240 638 aaKnown RBP7.45□□□□□ -1.22
UBE4B-208ENST00000475795 PPP1R2P41236 205 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 CTSOP43234 321 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-208ENST00000475795 GPD2P43304 727 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 ACADSBP45954 432 aa7.45□□□□□ -1.22
UBE4B-208ENST00000475795 GALCP54803 685 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms