RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 FAM207AQ9NSI2 230 aaPredicted RBP9.75□□□□□ -0.85
PDPN-204ENST00000475043 ASNSD1Q9NWL6 643 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 PILRBQ9UKJ0 227 aa9.75□□□□□ -0.85
PDPN-204ENST00000475043 MEI4A8MW99 385 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 GOLGA8SH3BPF8 625 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 DAB1O75553 588 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 GFPT2O94808 682 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 MMEP08473 750 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 ENGP17813 658 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 MAOBP27338 520 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 NOS2P35228 1153 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 HOXD12P35452 270 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 CSKP41240 450 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 MATKP42679 507 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 MAPK8P45983 427 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 SULT1E1P49888 294 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 ATXN3P54252 364 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 CAMK2GQ13555 558 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 PTPRNQ16849 979 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 DUOXA1Q1HG43 343 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 UAP1L1Q3KQV9 507 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 C2CD6Q53TS8 623 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 PITRM1Q5JRX3 1037 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 RABGAP1LQ5R372 815 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 SYCP2LQ5T4T6 812 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 CCDC183Q5T5S1 534 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 FAM102AQ5T9C2 384 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 DAB2IPQ5VWQ8 1189 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 RNF219Q5W0B1 726 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 SLC26A9Q7LBE3 791 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 METTL3Q86U44 580 aaKnown RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 CIR1Q86X95 450 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 MSANTD4Q8NCY6 345 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 CPA5Q8WXQ8 436 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 FOXJ1Q92949 421 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 C18orf8Q96DM3 657 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 RPRD1AQ96P16 312 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 SPAG5Q96R06 1193 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 GTPBP2Q9BX10 602 aaKnown RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 FSCN3Q9NQT6 498 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 WSB2Q9NYS7 404 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDPN-204ENST00000475043 KIAA1522Q9P206 1035 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 USP36Q9P275 1121 aaKnown RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 SUN2Q9UH99 717 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 EVLQ9UI08 416 aaPredicted RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 STAP1Q9ULZ2 295 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 PCDHB3Q9Y5E6 796 aa9.74□□□□□ -0.85
PDPN-204ENST00000475043 NYNRINQ9P2P1 1898 aaKnown RBP9.74□□□□□ -0.85
PDPN-204ENST00000475043 LSM8O95777 96 aaKnown RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 DNTTP04053 509 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 ASLP04424 464 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 GNSP15586 552 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 OXTRP30559 389 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 CDH5P33151 784 aaPredicted RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 GGCXP38435 758 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 COPB1P53618 953 aaKnown RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 CENPCQ03188 943 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 UBXN1Q04323 297 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 DEUP1Q05D60 604 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 GFPT1Q06210 699 aaPredicted RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 EIF4EBP2Q13542 120 aaPredicted RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 AUHQ13825 339 aaKnown RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 PLEKHG6Q3KR16 790 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 WDR45BQ5MNZ6 344 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 NAA35Q5VZE5 725 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 SLC23A3Q6PIS1 610 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 SND1Q7KZF4 910 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDPN-204ENST00000475043 RABEPKQ7Z6M1 372 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 DHX40Q8IX18 779 aaKnown RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 APCDD1Q8J025 514 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 CCAR2Q8N163 923 aaKnown RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 ZNF397Q8NF99 534 aaPredicted RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 NEK11Q8NG66 645 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 CEP76Q8TAP6 659 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 EPS8L1Q8TE68 723 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 SLC20A1Q8WUM9 679 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 TTC17Q96AE7 1141 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 ZNF419Q96HQ0 510 aaPredicted RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 LMLNQ96KR4 655 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 PRMT1Q99873 361 aaKnown RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 NUP58Q9BVL2 599 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 SIK2Q9H0K1 926 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 GANQ9H2C0 597 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 MTG2Q9H4K7 406 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 WDCPQ9H6R7 721 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 PRSS16Q9NQE7 514 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 RRN3Q9NYV6 651 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 INTS6Q9UL03 887 aaKnown RBP9.73□□□□□ -0.85
PDPN-204ENST00000475043 VANGL2Q9ULK5 521 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 SLC6A14Q9UN76 642 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 ERVW-1Q9UQF0 538 aa9.73□□□□□ -0.85
PDPN-204ENST00000475043 LAMA1P25391 3075 aa9.72□□□□□ -0.85
PDPN-204ENST00000475043 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.72□□□□□ -0.85
PDPN-204ENST00000475043 A0A1B0GVM2 712 aa9.72□□□□□ -0.85
PDPN-204ENST00000475043 TCAF2A6NFQ2 919 aa9.72□□□□□ -0.85
PDPN-204ENST00000475043 CDX4O14627 284 aaPredicted RBP9.72□□□□□ -0.85
PDPN-204ENST00000475043 TM4SF5O14894 197 aa9.72□□□□□ -0.85
PDPN-204ENST00000475043 EPHB6O15197 1021 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms