RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 CHST13Q8NET6 341 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 LENG1Q96BZ8 264 aaPredicted RBP14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 CERS2Q96G23 380 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 CDRT15Q96T59 188 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 SLC4A5Q9BY07 1137 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 APPL1Q9UKG1 709 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 RAB26Q9ULW5 256 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 AP4B1Q9Y6B7 739 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 C19orf81C9J6K1 198 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 CFLARO15519 480 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 IQCF3P0C7M6 154 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 CCDC130P13994 396 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 RBP5P82980 135 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 TNFAIP2Q03169 654 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 NADK2Q4G0N4 442 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 KYQ8NBH2 561 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 DNAJC1Q96KC8 554 aaKnown RBP14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 CPNE1Q99829 537 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 GRIP2Q9C0E4 1043 aa14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 BRCA1P38398 1863 aaKnown RBP14.58□□□□□ -0.08
NHLRC3-204ENST00000473371 SSC5DA1L4H1 1573 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 KPNA7A9QM74 516 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 RNF103O00237 685 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 CD1EP15812 388 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 GOT1P17174 413 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 MSX2P35548 267 aaPredicted RBP14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 SERPINB8P50452 374 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 ADGRE1Q14246 886 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 KLHDC10Q6PID8 442 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 BNC2Q6ZN30 1099 aaPredicted RBP14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 TMEM110Q86TL2 294 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 HACE1Q8IYU2 909 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 CATSPER1Q8NEC5 780 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 PPP1R16BQ96T49 567 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 MRPS26Q9BYN8 205 aaKnown RBP14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 ASB7Q9H672 318 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 WDR55Q9H6Y2 383 aaPredicted RBP14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 COPS7BQ9H9Q2 264 aaPredicted RBP14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 DPP3Q9NY33 737 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 PCDHGB4Q9UN71 923 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 PCDHGB5Q9Y5G0 923 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 HACD1B0YJ81 288 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 TMEM114B3SHH9 223 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 DGKIO75912 1065 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 TMCC1O94876 653 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 GLDCP23378 1020 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 PSMB4P28070 264 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 SPRP35270 261 aaPredicted RBP14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 ARL4AP40617 200 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 SLC10A6Q3KNW5 377 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 HSDL1Q3SXM5 330 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 HSP90AA5PQ58FG0 334 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 PPM1LQ5SGD2 360 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 IYDQ6PHW0 289 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 DSELQ8IZU8 1212 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 TTC39CQ8N584 583 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 CCDC185Q8N715 623 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 ZFRQ96KR1 1074 aaKnown RBP14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 FERMT1Q9BQL6 677 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 PRMT7Q9NVM4 692 aaPredicted RBP14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 BCAP29Q9UHQ4 241 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 HACL1Q9UJ83 578 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 DOCK1Q14185 1865 aa14.57□□□□□ -0.08
NHLRC3-204ENST00000473371 RGSL1A5PLK6 1076 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 TRIM13O60858 407 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 TNFAIP8O95379 198 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 F7P08709 466 aaPredicted RBP14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 XRCC1P18887 633 aaPredicted RBP14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 THOP1P52888 689 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 SNX16P57768 344 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 USP46P62068 366 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 TMEM259Q4ZIN3 620 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 PRAMEF18Q5VWM3 479 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 STRA8Q7Z7C7 330 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 PYROXD2Q8N2H3 581 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 METTL25Q8N6Q8 603 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 CLEC4CQ8WTT0 213 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 CPB2Q96IY4 423 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 PGLYRP2Q96PD5 576 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 EIF2B3Q9NR50 452 aaKnown RBP14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 SETSIPP0DME0 302 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 MCF2P10911 925 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 PTPN9P43378 593 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 ABCG1P45844 678 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 PKNOX1P55347 436 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 SPANXN3Q5MJ09 141 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 SH2D4BQ5SQS7 431 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 ZFP1Q6P2D0 407 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 CCNYQ8ND76 341 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 GPR20Q99678 358 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 RBBP8Q99708 897 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 MAF1Q9H063 256 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 ILKAPQ9H0C8 392 aaPredicted RBP14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 PREBQ9HCU5 417 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 ADAM28Q9UKQ2 775 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 PTPRFP10586 1907 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 A0A096LPK6 155 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 SOWAHBA6NEL2 793 aa14.56□□□□□ -0.08
NHLRC3-204ENST00000473371 G3V2L1 256 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms