RNA–Protein interactions for RNA: ENST00000471364.1

RUBCN-208, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-208ENST00000471364 NFU1Q9UMS0 254 aa13.15□□□□□ -0.3
RUBCN-208ENST00000471364 CHD6Q8TD26 2715 aa13.15□□□□□ -0.3
RUBCN-208ENST00000471364 CEP192Q8TEP8 1941 aa13.15□□□□□ -0.3
RUBCN-208ENST00000471364 TRAV19A0A0A6YYK7 116 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 C2CD4BA6NLJ0 364 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 PAPSS1O43252 624 aaPredicted RBP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 LRCH4O75427 683 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 CKMP06732 381 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 SNX16P57768 344 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 SLC6A3Q01959 620 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 SLC25A11Q02978 314 aaKnown RBP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 ZNF77Q15935 545 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 DDR2Q16832 855 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 KCTD19Q17RG1 926 aaPredicted RBP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 CCDC142Q17RM4 750 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 USP39Q53GS9 565 aaKnown RBP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 SDHAF4Q5VUM1 108 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 NAIF1Q69YI7 327 aaPredicted RBP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 EMBQ6PCB8 327 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 OLFML1Q6UWY5 402 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 PAQR9Q6ZVX9 377 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 SND1Q7KZF4 910 aaKnown RBP eCLIP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 DDX42Q86XP3 938 aaKnown RBP eCLIP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 STKLD1Q8NE28 680 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 TSTD1Q8NFU3 115 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 C1orf54Q8WWF1 131 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 RXFP2Q8WXD0 754 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 SEC14L1Q92503 715 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 RNF25Q96BH1 459 aaPredicted RBP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 MYRFLQ96LU7 910 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 GDAP1L1Q96MZ0 367 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 RUNDC3BQ96NL0 473 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 SYT15Q9BQS2 421 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 ACBD6Q9BR61 282 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 LRRC19Q9H756 370 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 CYLDQ9NQC7 956 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 DDX43Q9NXZ2 648 aaKnown RBP13.14□□□□□ -0.31
RUBCN-208ENST00000471364 PCYOX1Q9UHG3 505 aa13.14□□□□□ -0.31
RUBCN-208ENST00000471364 PI4KAP42356 2102 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 LNP1A1A4G5 178 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 KHNYNO15037 678 aaKnown RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 DAPK3O43293 454 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 CYP2F1P24903 491 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 IL1R2P27930 398 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 ECHS1P30084 290 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 CETN2P41208 172 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 LHX1P48742 406 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 FNTAP49354 379 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 ZNF143P52747 638 aaPredicted RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 USP4Q13107 963 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 KLF1Q13351 362 aaPredicted RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 NNTQ13423 1086 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 CUL1Q13616 776 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 ACAP1Q15027 740 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 HADHQ16836 314 aaKnown RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 EML3Q32P44 896 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 MDH1BQ5I0G3 518 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 INTS6LQ5JSJ4 861 aaKnown RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 PMS2CLQ68D20 193 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 CCDC137Q6PK04 289 aaKnown RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 UNQ6494/PRO21346Q6UXR6 183 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 SPOCD1Q6ZMY3 1216 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 POLNQ7Z5Q5 900 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 ZDHHC17Q8IUH5 632 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 EIF1ADQ8N9N8 165 aaKnown RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 RAPGEF5Q92565 580 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 CAVIN3Q969G5 261 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 HSFY1Q96LI6 401 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 CYP2S1Q96SQ9 504 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 CNPY3Q9BT09 278 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 HEMGNQ9BXL5 484 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 DUSP16Q9BY84 665 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 B3GNT5Q9BYG0 378 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 DCLK3Q9C098 648 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 RAB17Q9H0T7 212 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 NEUROG2Q9H2A3 272 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 DPH5Q9H2P9 285 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 TMEM9BQ9NQ34 198 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 CRTAC1Q9NQ79 661 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 FAM114A2Q9NRY5 505 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 PLXND1Q9Y4D7 1925 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 TNRC6BQ9UPQ9 1833 aaKnown RBP13.13□□□□□ -0.31
RUBCN-208ENST00000471364 FRYQ5TBA9 3013 aa13.13□□□□□ -0.31
RUBCN-208ENST00000471364 C1QTNF9BB2RNN3 333 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 CLDN5O00501 218 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 GIPC1O14908 333 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 XPO1O14980 1071 aaKnown RBP13.12□□□□□ -0.31
RUBCN-208ENST00000471364 GRAP2O75791 330 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 RNF8O76064 485 aa13.12□□□□□ -0.31
RUBCN-208ENST00000471364 TRUB2O95900 331 aaKnown RBP13.12□□□□□ -0.31
RUBCN-208ENST00000471364 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms