RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MDM1Q8TC05 714 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 DDI1Q8WTU0 396 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 ARID3AQ99856 593 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 LHX5Q9H2C1 402 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 TMEM245Q9H330 911 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 FBRSQ9HAH7 460 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 SCUBE2Q9NQ36 999 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 CISHQ9NSE2 258 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 STOML2Q9UJZ1 356 aa9.43□□□□□ -0.9
SF3A1-206ENST00000471037 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.43□□□□□ -0.9
SF3A1-206ENST00000471037 BZW2Q9Y6E2 419 aaKnown RBP9.43□□□□□ -0.9
SF3A1-206ENST00000471037 A0A1B0GVT2 93 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 SLC12A8A0AV02 714 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 GFPT2O94808 682 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 LATS1O95835 1130 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 ZBED1O96006 694 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 SERPING1P05155 500 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 KRT5P13647 590 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 HLA-EP13747 358 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 HLA-FP30511 346 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 ACSL1P33121 698 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 USP8P40818 1118 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 RAD23BP54727 409 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 YWHAGP61981 247 aaKnown RBP eCLIP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 ZBTB16Q05516 673 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 SUZ12Q15022 739 aaKnown RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 KIF19Q2TAC6 998 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 COL28A1Q2UY09 1125 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 ZNF394Q53GI3 561 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 SOWAHCQ53LP3 525 aaPredicted RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 E4F1Q66K89 784 aaPredicted RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 C19orf48Q6RUI8 117 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 RSRC2Q7L4I2 434 aaKnown RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 BHLHA9Q7RTU4 235 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 KIAA0907Q7Z7F0 614 aaPredicted RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 CACUL1Q86Y37 369 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 TMTC1Q8IUR5 882 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 ANKRD52Q8NB46 1076 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 SLC4A11Q8NBS3 891 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 RHBDD1Q8TEB9 315 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 WFIKKN2Q8TEU8 576 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 SORCS1Q8WY21 1168 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 TRIM44Q96DX7 344 aaPredicted RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 TMEM176AQ96HP8 235 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 HEXIM2Q96MH2 286 aaKnown RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 BAG1Q99933 345 aaPredicted RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 C6orf106Q9H6K1 298 aaPredicted RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 OLA1Q9NTK5 396 aaKnown RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 HBS1LQ9Y450 684 aaKnown RBP9.42□□□□□ -0.9
SF3A1-206ENST00000471037 PCDHB4Q9Y5E5 795 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 SLCO1B1Q9Y6L6 691 aa9.42□□□□□ -0.9
SF3A1-206ENST00000471037 PTPRBP23467 1997 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 SSU72P8A0A1W2PR75 194 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 XPO1O14980 1071 aaKnown RBP9.41□□□□□ -0.9
SF3A1-206ENST00000471037 PAPSS1O43252 624 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-206ENST00000471037 PCDHGA12O60330 932 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 TSPAN3O60637 253 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 PAEPP09466 180 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 ATXN1LP0C7T5 689 aaKnown RBP9.41□□□□□ -0.9
SF3A1-206ENST00000471037 PNMA6AP0CW24 399 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-206ENST00000471037 GRK6P43250 576 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 HARS2P49590 506 aaKnown RBP9.41□□□□□ -0.9
SF3A1-206ENST00000471037 CSNK1EP49674 416 aaKnown RBP9.41□□□□□ -0.9
SF3A1-206ENST00000471037 TKTL1P51854 596 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 SLC8A3P57103 927 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 ARID5AQ03989 594 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 PTK2Q05397 1052 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 KLHL30Q0D2K2 578 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 CAMK2BQ13554 666 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 TEAD4Q15561 434 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 PTPRNQ16849 979 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 TDRD12Q587J7 1177 aaKnown RBP9.41□□□□□ -0.9
SF3A1-206ENST00000471037 HGSNATQ68CP4 663 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 WDR59Q6PJI9 974 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 TMEM270Q6UE05 265 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 IRF2BP2Q7Z5L9 587 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 ADIPOR2Q86V24 386 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 FAM124AQ86V42 546 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 VPS36Q86VN1 386 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 ZNF677Q86XU0 584 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 TMEM139Q8IV31 216 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 AHI1Q8N157 1196 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 GALNT15Q8N3T1 639 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 SNX19Q92543 992 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 IGSF8Q969P0 613 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-206ENST00000471037 BTBD1Q9H0C5 482 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 TM9SF3Q9HD45 589 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 PLA2G4CQ9UP65 541 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 BTBD3Q9Y2F9 522 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 ANKRD6Q9Y2G4 727 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 RAXQ9Y2V3 346 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 SNX11Q9Y5W9 270 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 NBEAQ8NFP9 2946 aa9.41□□□□□ -0.9
SF3A1-206ENST00000471037 CELSR3Q9NYQ7 3312 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 E9PAM4 449 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 TULP2O00295 520 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 ARHGAP6O43182 974 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 TNFSF14O43557 240 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 SEMA4FO95754 770 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms