RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 CUL1Q13616 776 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 GRIN2CQ14957 1233 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 PRKD1Q15139 912 aaPredicted RBP8.95□□□□□ -0.98
HDLBP-233ENST00000470710 PPP1R7Q15435 360 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 DARS2Q6PI48 645 aaKnown RBP8.95□□□□□ -0.98
HDLBP-233ENST00000470710 CHST9Q7L1S5 443 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 ZC3H18Q86VM9 953 aaKnown RBP8.95□□□□□ -0.98
HDLBP-233ENST00000470710 ARHGAP12Q8IWW6 846 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 IFT20Q8IY31 132 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 CPXM2Q8N436 756 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 CCDC89Q8N998 374 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 EIF1ADQ8N9N8 165 aaKnown RBP8.95□□□□□ -0.98
HDLBP-233ENST00000470710 ITFG1Q8TB96 612 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 SH3RF2Q8TEC5 729 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 TFB1MQ8WVM0 346 aaKnown RBP8.95□□□□□ -0.98
HDLBP-233ENST00000470710 USP13Q92995 863 aaPredicted RBP8.95□□□□□ -0.98
HDLBP-233ENST00000470710 PRICKLE1Q96MT3 831 aaPredicted RBP8.95□□□□□ -0.98
HDLBP-233ENST00000470710 PNKPQ96T60 521 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 TRIM51Q9BSJ1 452 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 TMEM121Q9BTD3 319 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 PARD6BQ9BYG5 372 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 S1PR5Q9H228 398 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 ADAM7Q9H2U9 754 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 KIF9Q9HAQ2 790 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 USP29Q9HBJ7 922 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 PCDH9Q9HC56 1237 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 TDP1Q9NUW8 608 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 GDE1Q9NZC3 331 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 MPP6Q9NZW5 540 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 CLEC1BQ9P126 229 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 SH3BP1Q9Y3L3 701 aa8.95□□□□□ -0.98
HDLBP-233ENST00000470710 A0A1B0GVM2 712 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 TCAF2A6NFQ2 919 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 SGK1O00141 431 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 DYNC1I1O14576 645 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 MTSS1O43312 755 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 CLDN11O75508 207 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 CNTN5O94779 1100 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 PRAMEF12O95522 483 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 KRT14P02533 472 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 CHKAP35790 457 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 GARSP41250 739 aaKnown RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 IRAK1P51617 712 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 YBEYP58557 167 aaPredicted RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 RPS24P62847 133 aaKnown RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 PPIDQ08752 370 aaKnown RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 ADGRE1Q14246 886 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 ZNF77Q15935 545 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 ALFQ53S48 1182 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 MPP7Q5T2T1 576 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 PRPF38BQ5VTL8 546 aaKnown RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 RNF43Q68DV7 783 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 RFWD3Q6PCD5 774 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 C4orf22Q6V702 233 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 GSTA5Q7RTV2 222 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 TFAP2DQ7Z6R9 452 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 ARID3BQ8IVW6 561 aaPredicted RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 BBS7Q8IWZ6 715 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 NPAS3Q8IXF0 933 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 FAM71DQ8N9W8 422 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 HJURPQ8NCD3 748 aaPredicted RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 RSAD2Q8WXG1 361 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 ING5Q8WYH8 240 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 FATE1Q969F0 183 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 HDAC11Q96DB2 347 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 MYEOVQ96EZ4 313 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 ZSWIM3Q96MP5 696 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 TSGA13Q96PP4 275 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 FERMT1Q9BQL6 677 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 FAM129AQ9BZQ8 928 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 SMG9Q9H0W8 520 aaKnown RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 EPC1Q9H2F5 836 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 NOL6Q9H6R4 1146 aaKnown RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 TRPV4Q9HBA0 871 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 EPB41L5Q9HCM4 733 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 FAM114A2Q9NRY5 505 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 CCL26Q9Y258 94 aa8.94□□□□□ -0.98
HDLBP-233ENST00000470710 PRRC2BQ5JSZ5 2229 aaKnown RBP8.94□□□□□ -0.98
HDLBP-233ENST00000470710 ATG2AQ2TAZ0 1938 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 ANAPC1Q9H1A4 1944 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.93□□□□□ -0.98
HDLBP-233ENST00000470710 ILVBLA1L0T0 632 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 C5orf60A6NFR6 353 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 ZSCAN5CA6NGD5 496 aaPredicted RBP8.93□□□□□ -0.98
HDLBP-233ENST00000470710 ARHGAP42A6NI28 874 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 SOX1O00570 391 aaPredicted RBP8.93□□□□□ -0.98
HDLBP-233ENST00000470710 SLC9A3R1O14745 358 aaPredicted RBP8.93□□□□□ -0.98
HDLBP-233ENST00000470710 NDC80O14777 642 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 KCNN4O15554 427 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 RAMP2O60895 175 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 TBX10O75333 385 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 GCATO75600 419 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 MAP3K6O95382 1288 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 IFNB1P01574 187 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 VAV1P15498 845 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 CCNCP24863 283 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 IVDP26440 423 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 RBL1P28749 1068 aa8.93□□□□□ -0.98
HDLBP-233ENST00000470710 MTHFRP42898 656 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms