RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 MIS12Q9H081 205 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 EBF1Q9UH73 591 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 ALG6Q9Y672 507 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 DNAH14Q0VDD8 3507 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 CACNA1AO00555 2505 aa18.24■□□□□ 0.51
MRPL28-208ENST00000469744 BHMG1C9JSJ3 638 aaPredicted RBP18.24■□□□□ 0.51
MRPL28-208ENST00000469744 UNGP13051 313 aaPredicted RBP18.24■□□□□ 0.51
MRPL28-208ENST00000469744 STILQ15468 1287 aa18.24■□□□□ 0.51
MRPL28-208ENST00000469744 EGFLAMQ63HQ2 1017 aa18.24■□□□□ 0.51
MRPL28-208ENST00000469744 DENND1BQ6P3S1 775 aa18.24■□□□□ 0.51
MRPL28-208ENST00000469744 UBL4BQ8N7F7 174 aa18.24■□□□□ 0.51
MRPL28-208ENST00000469744 CAVIN3Q969G5 261 aa18.24■□□□□ 0.51
MRPL28-208ENST00000469744 DCLK3Q9C098 648 aa18.24■□□□□ 0.51
MRPL28-208ENST00000469744 GOLPH3Q9H4A6 298 aa18.24■□□□□ 0.51
MRPL28-208ENST00000469744 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.24■□□□□ 0.51
MRPL28-208ENST00000469744 PRRT4C9JH25 899 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 DGKGP49619 791 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 DNA2P51530 1060 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 RSPO4Q2I0M5 234 aaPredicted RBP18.23■□□□□ 0.51
MRPL28-208ENST00000469744 EOGTQ5NDL2 527 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 PLD4Q96BZ4 506 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 ACOX2Q99424 681 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 KRT12Q99456 494 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 ARRDC1-AS1Q9H2J1 176 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 MED4Q9NPJ6 270 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 ST7Q9NRC1 585 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 ABCC13Q9NSE7 274 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 OLA1Q9NTK5 396 aaKnown RBP18.23■□□□□ 0.51
MRPL28-208ENST00000469744 ZNF510Q9Y2H8 683 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 THADAQ6YHU6 1953 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 LAMA1P25391 3075 aa18.23■□□□□ 0.51
MRPL28-208ENST00000469744 TCRBV21S2A2A0A5A6 115 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 THAP12O43422 761 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 CYP1A1P04798 512 aaPredicted RBP18.22■□□□□ 0.51
MRPL28-208ENST00000469744 CISD3P0C7P0 127 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 CTNNA2P26232 953 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 TRIP4Q15650 581 aaPredicted RBP18.22■□□□□ 0.51
MRPL28-208ENST00000469744 PLK5Q496M5 336 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 PREPLQ4J6C6 727 aaPredicted RBP18.22■□□□□ 0.51
MRPL28-208ENST00000469744 FYB2Q5VWT5 728 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 RASSF3Q86WH2 238 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 SCML4Q8N228 414 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 HMGB4Q8WW32 186 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 ZNF653Q96CK0 615 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 VCPIP1Q96JH7 1222 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 SEMA4GQ9NTN9 838 aa18.22■□□□□ 0.51
MRPL28-208ENST00000469744 TSPAN3O60637 253 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 PENKP01210 267 aaPredicted RBP18.21■□□□□ 0.51
MRPL28-208ENST00000469744 LTFP02788 710 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 OAS2P29728 719 aaKnown RBP18.21■□□□□ 0.51
MRPL28-208ENST00000469744 GNA15P30679 374 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 GBP1P32455 592 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 CHKAP35790 457 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 GPD2P43304 727 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 CENPCQ03188 943 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 HSF5Q4G112 596 aaPredicted RBP18.21■□□□□ 0.51
MRPL28-208ENST00000469744 NUDT18Q6ZVK8 323 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 SCUBE3Q8IX30 993 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 ZNF564Q8TBZ8 553 aaPredicted RBP18.21■□□□□ 0.51
MRPL28-208ENST00000469744 ZNF606Q8WXB4 792 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 RLN3Q8WXF3 142 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 HSFY1Q96LI6 401 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 DUSP15Q9H1R2 295 aaPredicted RBP18.21■□□□□ 0.51
MRPL28-208ENST00000469744 SMOC1Q9H4F8 434 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 BCCIPQ9P287 314 aaKnown RBP eCLIP18.21■□□□□ 0.51
MRPL28-208ENST00000469744 CYTH4Q9UIA0 394 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 CLEC4EQ9ULY5 219 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 HPCAL4Q9UM19 191 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 HBS1LQ9Y450 684 aaKnown RBP18.21■□□□□ 0.51
MRPL28-208ENST00000469744 SPTBN2O15020 2390 aa18.21■□□□□ 0.51
MRPL28-208ENST00000469744 CCDC66A2RUB6 948 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 KRIT1O00522 736 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 ALDH1A2O94788 518 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 HEXIM1O94992 359 aaKnown RBP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 MYBL2P10244 700 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 BCKDHBP21953 392 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 HARS2P49590 506 aaKnown RBP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 SLC7A5Q01650 507 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 LMNB2Q03252 620 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 USP39Q53GS9 565 aaKnown RBP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 MAATS1Q7Z4T9 603 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 MCOLN2Q8IZK6 566 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 IRGQQ8WZA9 623 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 NUP85Q9BW27 656 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 POLMQ9NP87 494 aaPredicted RBP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 CNOT8Q9UFF9 292 aaKnown RBP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 LRP3O75074 770 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 EPN2O95208 641 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 HOXB2P14652 356 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 NTSR1P30989 418 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 TNNT3P45378 269 aaPredicted RBP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 CUL1Q13616 776 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 SF3A2Q15428 464 aaKnown RBP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 CSRP2Q16527 193 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 GEN1Q17RS7 908 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 MSANTD2Q6P1R3 559 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 PRR23CQ6ZRP0 262 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 CHPFQ8IZ52 775 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 PGBD3Q8N328 593 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 CPXM2Q8N436 756 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms