RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CLIC1O00299 241 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 PRYO14603 147 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 CD4P01730 458 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 SFPQP23246 707 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM5-209ENST00000468872 CERS1P27544 350 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 NDUFS1P28331 727 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 EPHB2P29323 1055 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 PNPLA4P41247 253 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 STAT6P42226 847 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 PCP4P48539 62 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 NR1H2P55055 460 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 MAPRE1Q15691 268 aaKnown RBP5.65□□□□□ -1.5
LSM5-209ENST00000468872 CNGA3Q16281 694 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 CBWD5Q5RIA9 395 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 PRAMEF17Q5VTA0 474 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 DCDC5Q6ZRR9 648 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 NEK8Q86SG6 692 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 PPHLN1Q8NEY8 458 aaKnown RBP5.65□□□□□ -1.5
LSM5-209ENST00000468872 DAZAP1Q96EP5 407 aaKnown RBP5.65□□□□□ -1.5
LSM5-209ENST00000468872 RRP36Q96EU6 259 aaKnown RBP5.65□□□□□ -1.5
LSM5-209ENST00000468872 SLC26A6Q9BXS9 759 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 CLPBQ9H078 707 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 AFG3L2Q9Y4W6 797 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 TCRBV5S1A1TA0A578 114 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 C16orf96A6NNT2 1141 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 TSPAN3O60637 253 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 HNRNPA1P09651 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM5-209ENST00000468872 LYL1P12980 280 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 MPGP29372 298 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 SLC8A1P32418 973 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 SLC37A1P57057 533 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 GEMIN4P57678 1058 aaKnown RBP5.64□□□□□ -1.51
LSM5-209ENST00000468872 TUBA4AP68366 448 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 CDK18Q07002 472 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM5-209ENST00000468872 LARS2Q15031 903 aaKnown RBP5.64□□□□□ -1.51
LSM5-209ENST00000468872 ANO7Q6IWH7 933 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 SLC39A5Q6ZMH5 540 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 TRIM72Q6ZMU5 477 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 MAATS1Q7Z4T9 603 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 PCYOX1LQ8NBM8 494 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 STAMQ92783 540 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 SKA1Q96BD8 255 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 HS6ST2Q96MM7 605 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 GPR78Q96P69 363 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 AGXT2Q9BYV1 514 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 UNC45AQ9H3U1 944 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 TLR8Q9NR97 1041 aaKnown RBP5.64□□□□□ -1.51
LSM5-209ENST00000468872 MTMR4Q9NYA4 1195 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 TFCP2L1Q9NZI6 479 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 HSF4Q9ULV5 492 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 SPATA31A1Q5TZJ5 1347 aa5.64□□□□□ -1.51
LSM5-209ENST00000468872 TP73O15350 636 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 MBD4O95243 580 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 CYP2D6P10635 497 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 ELF1P32519 619 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 HOXA4Q00056 320 aaPredicted RBP5.63□□□□□ -1.51
LSM5-209ENST00000468872 LMOD3Q0VAK6 560 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 THOC5Q13769 683 aaKnown RBP5.63□□□□□ -1.51
LSM5-209ENST00000468872 KCNB1Q14721 858 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 WDR45BQ5MNZ6 344 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 SLC9C2Q5TAH2 1124 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 TMEM65Q6PI78 240 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 YTHDF3Q7Z739 585 aaKnown RBP5.63□□□□□ -1.51
LSM5-209ENST00000468872 ADGRF3Q8IZF5 1079 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 ANKRD44Q8N8A2 993 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 SRFBP1Q8NEF9 429 aaKnown RBP5.63□□□□□ -1.51
LSM5-209ENST00000468872 ST8SIA4Q92187 359 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 PPP1R10Q96QC0 940 aaKnown RBP5.63□□□□□ -1.51
LSM5-209ENST00000468872 SH2D3AQ9BRG2 576 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 HTATIP2Q9BUP3 242 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 NRIP3Q9NQ35 241 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 SLC22A11Q9NSA0 550 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 BTBD3Q9Y2F9 522 aa5.63□□□□□ -1.51
LSM5-209ENST00000468872 CCDC196A0A1B0GTZ2 297 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 NPIPB13A6NJU9 1138 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 NPIPB5A8MRT5 1133 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 TTC34A8MYJ7 566 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 NPIPB4C9JG80 1138 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 H7C1Q1 480 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 PEX12O00623 359 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 PPP6CO00743 305 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 DHX16O60231 1041 aaKnown RBP5.62□□□□□ -1.51
LSM5-209ENST00000468872 SLC3A2P08195 630 aaKnown RBP5.62□□□□□ -1.51
LSM5-209ENST00000468872 AVPR2P30518 371 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 HOXD12P35452 270 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 VPS41P49754 854 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 ZNF84P51523 738 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 SHC2P98077 582 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 B4GALNT1Q00973 533 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 SLC14A1Q13336 389 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 CEP78Q5JTW2 689 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 TMEM63BQ5T3F8 832 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 MORN5Q5VZ52 161 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 C11orf87Q6NUJ2 197 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 DENND1BQ6P3S1 775 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 TMEM88Q6PEY1 159 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 RSRC2Q7L4I2 434 aaKnown RBP5.62□□□□□ -1.51
LSM5-209ENST00000468872 CHSY1Q86X52 802 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms