RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 APOBEC2Q9Y235 224 aaKnown RBP4.61□□□□□ -1.67
SSR3-204ENST00000467733 SSX2IPQ9Y2D8 614 aa4.61□□□□□ -1.67
SSR3-204ENST00000467733 HS3ST4Q9Y661 456 aa4.61□□□□□ -1.67
SSR3-204ENST00000467733 SALL3Q9BXA9 1300 aa4.61□□□□□ -1.67
SSR3-204ENST00000467733 KIF26AQ9ULI4 1882 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 ATG2BQ96BY7 2078 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 C2orf78A6NCI8 922 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 SHISA7A6NL88 538 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 ZNF213O14771 459 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 BRINP1O60477 761 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 ULK1O75385 1050 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 RECQL4O94761 1208 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 PAPSS2O95340 614 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 CCNE2O96020 404 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 JUNP05412 331 aaKnown RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 ZNF806P0C7X5 589 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 VSIG10L2P0DP72 767 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 GLUD2P49448 558 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 NOVA1P51513 510 aaKnown RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 NLRP11P59045 1033 aaKnown RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 SATB1Q01826 763 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 ITGB3BPQ13352 177 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 MYBPC3Q14896 1274 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 SOWAHCQ53LP3 525 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 RNF187Q5TA31 235 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 HECTD2Q5U5R9 776 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 EGFLAMQ63HQ2 1017 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 ABHD15Q6UXT9 468 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 GPR65Q8IYL9 337 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 RNF168Q8IYW5 571 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 LINC01465Q8N7H1 131 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 URGCPQ8TCY9 931 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 NTN5Q8WTR8 489 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 FGF13Q92913 245 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 ARL8AQ96BM9 186 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 PGBD4Q96DM1 585 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 DYDC2Q96IM9 177 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 HIST1H2AHQ96KK5 128 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 SCLT1Q96NL6 688 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 HIST1H2AJQ99878 128 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 KXD1Q9BQD3 176 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 MXRA8Q9BRK3 442 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 SPZ1Q9BXG8 430 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 KRT23Q9C075 422 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 MTG2Q9H4K7 406 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 LY9Q9HBG7 655 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 CHST12Q9NRB3 414 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 POLR3BQ9NW08 1133 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 MARCH5Q9NX47 278 aa4.6□□□□□ -1.67
SSR3-204ENST00000467733 USP9XQ93008 2570 aaPredicted RBP4.6□□□□□ -1.67
SSR3-204ENST00000467733 TRIM24O15164 1050 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 MAGEB2O15479 319 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 DAPK3O43293 454 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 TGM5O43548 720 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 KDM1AO60341 852 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 ECI2O75521 394 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 OFD1O75665 1012 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 DDHD2O94830 711 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 EPN2O95208 641 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 POU2F2P09086 479 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 HNRNPA1P09651 372 aaKnown RBP eCLIP4.59□□□□□ -1.67
SSR3-204ENST00000467733 SPATA31D3P0C874 917 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 MYBP10242 640 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 CDK4P11802 303 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 BPIP17213 487 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 NCLP19338 710 aaKnown RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 FGFR4P22455 802 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 XPAP23025 273 aaPredicted RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 SFPQP23246 707 aaKnown RBP eCLIP4.59□□□□□ -1.67
SSR3-204ENST00000467733 TMOD1P28289 359 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 HOXA9P31269 272 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 KIF5BP33176 963 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 CXCL12P48061 93 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 GPC3P51654 580 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 KRTAP10-11P60412 298 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 NTHL1P78549 312 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 CREMQ03060 361 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 SRSF5Q13243 272 aaKnown RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 ATMQ13315 3056 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 TERF2Q15554 542 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 CCDC6Q16204 474 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 MAN2A1Q16706 1144 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 UBE2SQ16763 222 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 GON4LQ3T8J9 2241 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 BROXQ5VW32 411 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 C1QL3Q5VWW1 255 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 ARID2Q68CP9 1835 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 TWF2Q6IBS0 349 aaKnown RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 MIS18BP1Q6P0N0 1132 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 THADAQ6YHU6 1953 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 SPATA31D4Q6ZUB0 917 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 KIAA1549LQ6ZVL6 1849 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 KANSL1Q7Z3B3 1105 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 GRASPQ7Z6J2 395 aaPredicted RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 LONP2Q86WA8 852 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 ZNF280BQ86YH2 543 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 ELOA2Q8IYF1 753 aaPredicted RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 LRRC71Q8N4P6 559 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 UBR7Q8N806 425 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 PLA2G15Q8NCC3 412 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms