RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 ECT2Q9H8V3 914 aa15.2■□□□□ 0.02
DDX56-208ENST00000467318 PCDH18Q9HCL0 1135 aa15.2■□□□□ 0.02
DDX56-208ENST00000467318 MARK1Q9P0L2 795 aa15.2■□□□□ 0.02
DDX56-208ENST00000467318 TCF20Q9UGU0 1960 aaKnown RBP15.2■□□□□ 0.02
DDX56-208ENST00000467318 LRRD1A4D1F6 860 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 H3BRJ5 948 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 ARNTLO00327 626 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 FGF10O15520 208 aaPredicted RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 KRT1P04264 644 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 ASGR2P07307 311 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 EPHB2P29323 1055 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 HOXC13P31276 330 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 GGCXP38435 758 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 CETN2P41208 172 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 TPI1P60174 286 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 COPS2P61201 443 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 GAD2Q05329 585 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 LY6G5CQ5SRR4 150 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 C14orf80Q86SX3 495 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 TMEM25Q86YD3 366 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 ZNF557Q8N988 423 aaPredicted RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 RAPGEF5Q92565 580 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 TBC1D31Q96DN5 1066 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 PKNOX2Q96KN3 472 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 TLR10Q9BXR5 811 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 CALN1Q9BXU9 219 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 ZYG11BQ9C0D3 744 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 CATSPERBQ9H7T0 1116 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 CWC15Q9P013 229 aaKnown RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 SNX10Q9Y5X0 201 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 MYO10Q9HD67 2058 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 A0A1B0GVM2 712 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 TCAF2A6NFQ2 919 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 TRDMT1O14717 391 aaKnown RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 DDX3YO15523 660 aaKnown RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 DAPK3O43293 454 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 TSPAN3O60637 253 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 CLDN11O75508 207 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 PENKP01210 267 aaPredicted RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 CYP17A1P05093 508 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 MARCKSL1P49006 195 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 VCPP55072 806 aaKnown RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 CDH4P55283 916 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 PFKPQ01813 784 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 DPYSL3Q14195 570 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 ANO4Q32M45 955 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 RWDD4Q6NW29 188 aaKnown RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 RFX8Q6ZV50 586 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 CHST9Q7L1S5 443 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 GOLGA6L1Q8N7Z2 621 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 CSGALNACT1Q8TDX6 532 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 ALG3Q92685 438 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 DNASE1L2Q92874 299 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 IGSF8Q969P0 613 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 PRICKLE1Q96MT3 831 aaPredicted RBP15.19■□□□□ 0.02
DDX56-208ENST00000467318 BBS2Q9BXC9 721 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 CARD9Q9H257 536 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 PRDM16Q9HAZ2 1276 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 HPS4Q9NQG7 708 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 ADAM21Q9UKJ8 722 aa15.19■□□□□ 0.02
DDX56-208ENST00000467318 KIF26AQ9ULI4 1882 aaPredicted RBP15.18■□□□□ 0.02
DDX56-208ENST00000467318 CES2O00748 559 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 HOXC11O43248 304 aaPredicted RBP15.18■□□□□ 0.02
DDX56-208ENST00000467318 CD48P09326 243 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 ADH5P11766 374 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 SRFP11831 508 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 ARSAP15289 507 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 RHOQP17081 205 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 GOT1P17174 413 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 IL4RP24394 825 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 RPS24P62847 133 aaKnown RBP15.18■□□□□ 0.02
DDX56-208ENST00000467318 TNK2Q07912 1038 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 ITPRIPL2Q3MIP1 535 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 TFDP3Q5H9I0 405 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 ARTNQ5T4W7 220 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 CCDC117Q8IWD4 279 aaPredicted RBP15.18■□□□□ 0.02
DDX56-208ENST00000467318 CFAP52Q8N1V2 620 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
DDX56-208ENST00000467318 FAF2Q96CS3 445 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 CSPG4P5Q96PW8 444 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 XPO6Q96QU8 1125 aaKnown RBP15.18■□□□□ 0.02
DDX56-208ENST00000467318 MAK16Q9BXY0 300 aaKnown RBP15.18■□□□□ 0.02
DDX56-208ENST00000467318 KLHL11Q9NVR0 708 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 SORCS3Q9UPU3 1222 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 EFR3BQ9Y2G0 817 aa15.18■□□□□ 0.02
DDX56-208ENST00000467318 C3orf70A6NLC5 250 aaPredicted RBP15.17■□□□□ 0.02
DDX56-208ENST00000467318 WASH4PA8MWX3 477 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 NEDD8-MDP1E9PL57 170 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 TBL1XO60907 577 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 TYRP14679 529 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 HOXD9P28356 352 aaPredicted RBP15.17■□□□□ 0.02
DDX56-208ENST00000467318 TNFRSF8P28908 595 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 PPP2R5EQ16537 467 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 TAZQ16635 292 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 ANKRD20A8PQ5CZ79 823 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 RNF43Q68DV7 783 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 MFSD7Q6UXD7 560 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 CCDC50Q8IVM0 306 aa15.17■□□□□ 0.02
DDX56-208ENST00000467318 SPATA4Q8NEY3 305 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms