RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 GUCY1A3Q02108 690 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 PDGFRLQ15198 375 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 EPHA7Q15375 998 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 VWA3BQ502W6 1294 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 XKR4Q5GH76 650 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 GPR158Q5T848 1215 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 EEF1DP3Q658K8 133 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 CDCA2Q69YH5 1023 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 TOGARAM2Q6ZUX3 1019 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 STRA8Q7Z7C7 330 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 DDX42Q86XP3 938 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 CPNE8Q86YQ8 564 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 RAB11FIP4Q86YS3 637 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 FMNL3Q8IVF7 1028 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 ZBTB8OSQ8IWT0 167 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 GALNT15Q8N3T1 639 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 TSTD1Q8NFU3 115 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 MDM1Q8TC05 714 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 TBCKQ8TEA7 893 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 PSMG2Q969U7 264 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 ZFYVE19Q96K21 471 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 LRRC3BQ96PB8 259 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 SORCS2Q96PQ0 1159 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 NAP1L4Q99733 375 aaKnown RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 P2RY13Q9BPV8 354 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 LXNQ9BS40 222 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 CDADC1Q9BWV3 514 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 RNF26Q9BY78 433 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 RWDD1Q9H446 243 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 PDZD7Q9H5P4 517 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 TNFRSF12AQ9NP84 129 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 KCNMB3Q9NPA1 279 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 XPNPEP1Q9NQW7 623 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 TOPORSQ9NS56 1045 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 GKN1Q9NS71 199 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 DDX56Q9NY93 547 aaKnown RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 WRAP73Q9P2S5 460 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-207ENST00000467273 PILRBQ9UKJ0 227 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 NID2Q14112 1375 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 PLXNB3Q9ULL4 1909 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 SHROOM3Q8TF72 1996 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 ABCA7Q8IZY2 2146 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 ATMQ13315 3056 aa5.87□□□□□ -1.47
PTCD3-207ENST00000467273 URB1O60287 2271 aaKnown RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PI4KAP42356 2102 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PCDH15Q96QU1 1955 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 MYO16Q9Y6X6 1858 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 A0A1W2PQD8 194 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 ACKR2O00590 384 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 CLGNO14967 610 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 SLC27A2O14975 620 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 AP5Z1O43299 807 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 OAZ2O95190 189 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PRAMEF12O95522 483 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 MSL3P1P0C860 447 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 JMJD7P0C870 316 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 XRCC6P12956 609 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PAMP19021 973 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 GLRA2P23416 452 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 DEKP35659 375 aaKnown RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 BRCC3P46736 316 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 ARPP19P56211 112 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 AKAP17AQ02040 695 aaKnown RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 GPR17Q13304 367 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PRPF4BQ13523 1007 aaKnown RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 ZNF268Q14587 947 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 NECTIN1Q15223 517 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 TESK1Q15569 626 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 INF2Q27J81 1249 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 LYSMD4Q5XG99 296 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 E4F1Q66K89 784 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 MBLAC2Q68D91 279 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 GALNT17Q6IS24 598 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 CC2D1AQ6P1N0 951 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 SLC36A4Q6YBV0 504 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 GAREM2Q75VX8 874 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PCGF5Q86SE9 256 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 MTDHQ86UE4 582 aaKnown RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 CDR2LQ86X02 465 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 CMTM8Q8IZV2 173 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PPM1KQ8N3J5 372 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 ZNF843Q8N446 348 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 CPA6Q8N4T0 437 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 RCBTB1Q8NDN9 531 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 MCPH1Q8NEM0 835 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 TTC8Q8TAM2 541 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 DIO2Q92813 273 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 CD101Q93033 1021 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 WBP1Q96G27 269 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PTCHD1Q96NR3 888 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 GCNAQ96QF7 691 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 ZDHHC5Q9C0B5 715 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 CLMPQ9H6B4 373 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 HPS4Q9NQG7 708 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 GPR27Q9NS67 375 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 GEMIN8Q9NWZ8 242 aaKnown RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 DDX25Q9UHL0 483 aaKnown RBP5.86□□□□□ -1.47
PTCD3-207ENST00000467273 MMP17Q9ULZ9 603 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 NUB1Q9Y5A7 615 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms