RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 HLA-BQ31612 363 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 C9orf64Q5T6V5 341 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 GBP6Q6ZN66 633 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 CHSY1Q86X52 802 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 LGI2Q8N0V4 545 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 CHCHD4Q8N4Q1 142 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 ATP6V0D2Q8N8Y2 350 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 SHC3Q92529 594 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 SNX19Q92543 992 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 SLC2A13Q96QE2 648 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 PRMT1Q99873 361 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 APEX2Q9UBZ4 518 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 TJP2Q9UDY2 1190 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 ADAMTS1Q9UHI8 967 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 XPO7Q9UIA9 1087 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 PCDHGC3Q9UN70 934 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 ERVW-1Q9UQF0 538 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 NCKAP1Q9Y2A7 1128 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 FNDC3AQ9Y2H6 1198 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 SLCO1B1Q9Y6L6 691 aa12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-203ENST00000466034 PKD1L2Q7Z442 2459 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 DMXL2Q8TDJ6 3036 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 EDDM13A0A1B0GTR0 161 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 KCNU1A8MYU2 1149 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 FLRT2O43155 660 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 SLC2A3P11169 496 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 SLC9A1P19634 815 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 CSNK1EP49674 416 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 PLK1P53350 603 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 UBE2HP62256 183 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 ECT2LQ008S8 904 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 MTA1Q13330 715 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 CST6Q15828 149 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 EXOC3L4Q17RC7 722 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 KIF19Q2TAC6 998 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 RAP1GAP2Q684P5 730 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 KIAA0895LQ68EN5 471 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 GJB7Q6PEY0 223 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 MMS22LQ6ZRQ5 1243 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 IRF2BP1Q8IU81 584 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 CFAP52Q8N1V2 620 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 WDTC1Q8N5D0 677 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 ZCCHC14Q8WYQ9 949 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 CDC6Q99741 560 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 CRACR2AQ9BSW2 395 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 MTG2Q9H4K7 406 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 ACP6Q9NPH0 428 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 FZD4Q9ULV1 537 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 APOBEC2Q9Y235 224 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 ANKRD6Q9Y2G4 727 aa12.88□□□□□ -0.35
SOX2-OT-203ENST00000466034 TMEM131Q92545 1883 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 A0A1B0GVM2 712 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 TCAF2A6NFQ2 919 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 TTC34A8MYJ7 566 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 F5H5T6 163 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 HSF2BPO75031 334 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 DKK1O94907 266 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 FSBPO95073 299 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 CAPNS1P04632 268 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 PON1P27169 355 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 CTSKP43235 329 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 OXCT1P55809 520 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 RACK1P63244 317 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 PITX1P78337 314 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 CDK17Q00537 523 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 SULT2A1Q06520 285 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 ARHGAP44Q17R89 818 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 DHX40Q8IX18 779 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 APCDD1Q8J025 514 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 IGSF8Q969P0 613 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 PPP1R13BQ96KQ4 1090 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 CPXM1Q96SM3 734 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 FAM129BQ96TA1 746 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 FBXL12Q9NXK8 326 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 TPX2Q9ULW0 747 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 SNX11Q9Y5W9 270 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 FREM2Q5SZK8 3169 aa12.87□□□□□ -0.35
SOX2-OT-203ENST00000466034 A0A1W2PPC4 97 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 LRRC72A6NJI9 287 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 SRRM3A6NNA2 597 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 MID1O15344 667 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 PCDHGA12O60330 932 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 DFNA5O60443 496 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 ADH1BP00325 375 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 ABCB4P21439 1286 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 CCR1P32246 355 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 CCR5P51681 352 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 GALCP54803 685 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 SNX16P57768 344 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 TAF5Q15542 800 aa12.86□□□□□ -0.35
SOX2-OT-203ENST00000466034 RABGAP1LQ5R372 815 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms