RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 FZD10Q9ULW2 581 aa14.95□□□□□ -0.02
COL5A1-205ENST00000464187 YIPF1Q9Y548 306 aa14.95□□□□□ -0.02
COL5A1-205ENST00000464187 GOLGA6L7A0A1B0GV03 622 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 C5orf67F2Z3F1 127 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 PRPF4O43172 522 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL5A1-205ENST00000464187 TSHRP16473 764 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 KRT15P19012 456 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 ALDH1A3P47895 512 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 WDR4P57081 412 aaKnown RBP14.94□□□□□ -0.02
COL5A1-205ENST00000464187 GEMIN4P57678 1058 aaKnown RBP14.94□□□□□ -0.02
COL5A1-205ENST00000464187 C3orf62Q6ZUJ4 267 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 TCEAL8Q8IYN2 117 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 RNF139Q8WU17 664 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 CCT6BQ92526 530 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 SGSM3Q96HU1 749 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 MAGEB18Q96M61 343 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 TLR8Q9NR97 1041 aaKnown RBP14.94□□□□□ -0.02
COL5A1-205ENST00000464187 SENP1Q9P0U3 644 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 SFMBT1Q9UHJ3 866 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 CHMP2BQ9UQN3 213 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 IRAK3Q9Y616 596 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 COL4A4P53420 1690 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-205ENST00000464187 TGM5O43548 720 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 SNX3O60493 162 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 IGLV3-25P01717 112 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 ADH1AP07327 375 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 DNAJB1P25685 340 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 ELK3P41970 407 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 PSEN1P49768 467 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 ACTN3Q08043 901 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-205ENST00000464187 EIF4EBP2Q13542 120 aaPredicted RBP14.94□□□□□ -0.02
COL5A1-205ENST00000464187 KLHL38Q2WGJ6 581 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 SYCP2LQ5T4T6 812 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 PALM2Q8IXS6 379 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 ANKS4BQ8N8V4 417 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 DENND1AQ8TEH3 1009 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 LRRN4Q8WUT4 740 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 CASP10Q92851 521 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 TGS1Q96RS0 853 aaKnown RBP14.94□□□□□ -0.02
COL5A1-205ENST00000464187 PAFAH2Q99487 392 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 SMOC2Q9H3U7 446 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 WDCPQ9H6R7 721 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 TLR9Q9NR96 1032 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 TMPRSS4Q9NRS4 437 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 RAB6BQ9NRW1 208 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 CLIC5Q9NZA1 410 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 FBXW11Q9UKB1 542 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 MAFFQ9ULX9 164 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 CAPN7Q9Y6W3 813 aa14.94□□□□□ -0.02
COL5A1-205ENST00000464187 CCT8L1PA6NM43 557 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 IRAK2O43187 625 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 PIAS1O75925 651 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 ASMTLO95671 621 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 SPATA31D3P0C874 917 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 CSH1P0DML2 217 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 CSH2P0DML3 217 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 FOXN2P32314 431 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 CXCR3P49682 368 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 GBE1Q04446 702 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 TWF1Q12792 350 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 SLC10A2Q12908 348 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-205ENST00000464187 LACTB2Q53H82 288 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-205ENST00000464187 PLPP4Q5VZY2 271 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 NUGGCQ68CJ6 796 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 SPATA31D4Q6ZUB0 917 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 PSTKQ8IV42 348 aaKnown RBP14.93□□□□□ -0.02
COL5A1-205ENST00000464187 CDKL3Q8IVW4 592 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-205ENST00000464187 C4orf33Q8N1A6 199 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 PYROXD2Q8N2H3 581 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 AGGF1Q8N302 714 aaeCLIP14.93□□□□□ -0.023e-9■■■□□ 18.3
COL5A1-205ENST00000464187 MRPL43Q8N983 215 aaKnown RBP14.93□□□□□ -0.02
COL5A1-205ENST00000464187 NTAN1Q96AB6 310 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 KLHL5Q96PQ7 755 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 CSPG4P5Q96PW8 444 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 SMC6Q96SB8 1091 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 EMILIN2Q9BXX0 1053 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 ACTR5Q9H9F9 607 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-205ENST00000464187 ANLNQ9NQW6 1124 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 INSL5Q9Y5Q6 135 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 TEX264Q9Y6I9 313 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 CEP290O15078 2479 aa14.93□□□□□ -0.02
COL5A1-205ENST00000464187 MYO18AQ92614 2054 aaKnown RBP14.93□□□□□ -0.02
COL5A1-205ENST00000464187 A0A1W2PPM1 405 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 HIDE1A8MVS5 230 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 MSI1O43347 362 aaKnown RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 RB1P06400 928 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 ZDHHC11BP0C7U3 371 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 HMGA1P17096 107 aaKnown RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 TAC1P20366 129 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 ADRA1BP35368 520 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 SLC18A1P54219 525 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 AIF1P55008 147 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 UBE3AQ05086 875 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 CBLBQ13191 982 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 VEPH1Q14D04 833 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 ZKSCAN8Q15776 578 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 ARL13BQ3SXY8 428 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 FAXCQ5TGI0 409 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 ADGRD1Q6QNK2 874 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms