RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 RNASE9P60153 205 aaKnown RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 CDK5R2Q13319 367 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CBX2Q14781 532 aaPredicted RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 ACAP1Q15027 740 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CCDC142Q17RM4 750 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ARL13BQ3SXY8 428 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 LEXMQ3ZCV2 418 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 DCAF6Q58WW2 860 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 GPR158Q5T848 1215 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ACBD5Q5T8D3 534 aaPredicted RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 SNX30Q5VWJ9 437 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ALG1LQ6GMV1 187 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CC2D1AQ6P1N0 951 aaPredicted RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 KLHDC10Q6PID8 442 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SYCE2Q6PIF2 218 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SEZ6L2Q6UXD5 910 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 MTSS1LQ765P7 747 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SLC26A9Q7LBE3 791 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 UNC45BQ8IWX7 931 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 YAF2Q8IY57 180 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CELF5Q8N6W0 485 aaKnown RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 SMRP1Q8NCR6 262 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ZMIZ2Q8NF64 920 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 FEZF2Q8TBJ5 459 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 RNF34Q969K3 372 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ZNF707Q96C28 371 aaPredicted RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 MCRS1Q96EZ8 462 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 PDLIM2Q96JY6 352 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 MSLNLQ96KJ4 702 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SERPINB11Q96P15 392 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CPXM1Q96SM3 734 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SYT11Q9BT88 431 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 APOL5Q9BWW9 433 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 DCLK3Q9C098 648 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 S1PR5Q9H228 398 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 KIF9Q9HAQ2 790 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.19□□□□□ -1.42
NUP98-208ENST00000461047 GMIPQ9P107 970 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CLEC1BQ9P126 229 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CTTNBP2NLQ9P2B4 639 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 UVRAGQ9P2Y5 699 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 MYO1AQ9UBC5 1043 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CNOT8Q9UFF9 292 aaKnown RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 IP6K2Q9UHH9 426 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ADGRE2Q9UHX3 823 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SLC5A6Q9Y289 635 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ZNF510Q9Y2H8 683 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 PCDHA13Q9Y5I0 950 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 PTPRSQ13332 1948 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SCN1AP35498 2009 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 A0A1W2PQH9 124 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 YJEFN3A6XGL0 299 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 E7ENQ6 273 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 H3BQ06 376 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 TULP2O00295 520 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 GIPC1O14908 333 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 PAPSS1O43252 624 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 TBX10O75333 385 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 GLP2RO95838 553 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 APOEP02649 317 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 MBL2P11226 248 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 PDGFRAP16234 1089 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 GPD1P21695 349 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 LTBRP36941 435 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 ARHGAP25P42331 645 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 VAV2P52735 878 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 CACNA2D1P54289 1103 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 GSCP56915 257 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 RBM10P98175 930 aaKnown RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 PIGHQ14442 188 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 CLUL1Q15846 466 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 HADHQ16836 314 aaKnown RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 ASTE1Q2TB18 679 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 SLC25A52Q3SY17 297 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 PTPN20Q4JDL3 420 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 ARHGAP29Q52LW3 1261 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 ODF2Q5BJF6 829 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 E4F1Q66K89 784 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 PLEKHA7Q6IQ23 1121 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 FAM183BPQ6ZVS7 135 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 MON1BQ7L1V2 547 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 GET4Q7L5D6 327 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 GPRIN1Q7Z2K8 1008 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 PDZD3Q86UT5 571 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 XYLT1Q86Y38 959 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 CCDC117Q8IWD4 279 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
NUP98-208ENST00000461047 CMTM8Q8IZV2 173 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 SYCE1Q8N0S2 351 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 DEFB106AQ8N104 65 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 KIAA1958Q8N8K9 716 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 MAB21L3Q8N8X9 362 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 TDRD5Q8NAT2 981 aaKnown RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 ATXN2LQ8WWM7 1075 aaKnown RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 EXOC4Q96A65 974 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 CNPY3Q9BT09 278 aa6.18□□□□□ -1.42
NUP98-208ENST00000461047 PHF7Q9BWX1 381 aaPredicted RBP6.18□□□□□ -1.42
NUP98-208ENST00000461047 FAM204AQ9H8W3 233 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms