RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NUB1Q9Y5A7 615 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PCDHGA7Q9Y5G6 932 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 RP1L1Q8IWN7 2480 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 CDK2AP1O14519 115 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 GRID2O43424 1007 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 HTRA2O43464 458 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PLIN3O60664 434 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ATG7O95352 703 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TGM1P22735 817 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 GARSP41250 739 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 CRKLP46109 303 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 VAMP7P51809 220 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP4CP60510 307 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 DGKZQ13574 1117 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ADGRE1Q14246 886 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 NEK10Q6ZWH5 1172 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 SPATC1Q76KD6 591 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 LSMEM2Q8N112 164 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 HCAR2Q8TDS4 363 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 RSPH1Q8WYR4 309 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF419Q96HQ0 510 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 WNK4Q96J92 1243 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 C7orf26Q96N11 449 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 NPAS2Q99743 824 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TSG101Q99816 390 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PRDM11Q9NQV5 511 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 RBAKQ9NYW8 714 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TAGLN3Q9UI15 199 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TRAF6Q9Y4K3 522 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ADAMTSL1Q8N6G6 1762 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 SCN9AQ15858 1988 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 A0A0G2JMP0 313 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 TK2O00142 265 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 GNPATO15228 680 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ENPP1P22413 925 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ALDH4A1P30038 563 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 GNL1P36915 607 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ECE1P42892 770 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 MXI1P50539 228 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 GJA9P57773 515 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 AP2B1P63010 937 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 CENPCQ03188 943 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 E2F2Q14209 437 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 CNGA3Q16281 694 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 CLPPQ16740 277 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 GRAMD4Q6IC98 578 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC9A9Q8IVB4 645 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 DSELQ8IZU8 1212 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ATP11CQ8NB49 1132 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 CMASQ8NFW8 434 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ZFP90Q8TF47 636 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 PYROXD1Q8WU10 500 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 E2F7Q96AV8 911 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 NSMCE3Q96MG7 304 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ATP13A3Q9H7F0 1226 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 NOL11Q9H8H0 719 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 KCNK4Q9NYG8 393 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC24A2Q9UI40 661 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 UTS2RQ9UKP6 389 aa4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 COL5A2P05997 1499 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF646O15015 1829 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-202ENST00000456315 KCNK2O95069 426 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 C1QCP02747 245 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 SERPINA6P08185 405 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 HSPA6P17066 643 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 ARNTP27540 789 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 SERPINB6P35237 376 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 HPCAL1P37235 193 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 GBE1Q04446 702 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 NME3Q13232 169 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 SPCS2Q15005 226 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 PTPN20Q4JDL3 420 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 C6orf10Q5SRN2 563 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 TSTD2Q5T7W7 516 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 SETD3Q86TU7 594 aaPredicted RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM35AQ86V20 835 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 ALDH16A1Q8IZ83 802 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 UBL4BQ8N7F7 174 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 BPIFB6Q8NFQ5 453 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 CCDC110Q8TBZ0 833 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 HEXIM2Q96MH2 286 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM20AQ96MK3 541 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 GLIS2Q9BZE0 524 aaPredicted RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 COG4Q9H9E3 785 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 PARVAQ9NVD7 372 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 PKD2L1Q9P0L9 805 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 SLAMF8Q9P0V8 285 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 RSL24D1Q9UHA3 163 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 SCML1Q9UN30 329 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 MTO1Q9Y2Z2 717 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 MIA3Q5JRA6 1907 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 EPHA2P29317 976 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 HIBADHP31937 336 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF135P52742 658 aaPredicted RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 YWHAZP63104 245 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 HIC1Q14526 733 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF829Q3KNS6 432 aaPredicted RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 CCDC58Q4VC31 144 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 FASTKD1Q53R41 847 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 KIF6Q6ZMV9 814 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms