RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 ASCC3Q8N3C0 2202 aaKnown RBP17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 ADAMTS9Q9P2N4 1935 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 SYNJ2BP-COX16A0A087WUM0 186 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 M0QYT0 321 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 SEMA4FO95754 770 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 CER1O95813 267 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 GABRB2P47870 512 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 PLK1P53350 603 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 ZNF252P-AS1Q0IIN9 211 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 SEMA3BQ13214 749 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 NME3Q13232 169 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 ZNF177Q13360 481 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 HSP90AA4PQ58FG1 418 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 CCAR2Q8N163 923 aaKnown RBP17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 MIR1-1HGQ9H1L0 117 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 WDCPQ9H6R7 721 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 OSGEPQ9NPF4 335 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 COX16Q9P0S2 106 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 FHOD1Q9Y613 1164 aa17.63■□□□□ 0.41
TNFRSF4-202ENST00000453580 PCDH15Q96QU1 1955 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 CLDN11O75508 207 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 GRAP2O75791 330 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 MBD3O95983 291 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 ERBB2P04626 1255 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 VASPP50552 380 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 AFF3P51826 1226 aaKnown RBP17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 KCNMA1Q12791 1236 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 TAF5Q15542 800 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 PTPN20Q4JDL3 420 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 LRRC31Q6UY01 552 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 RBM43Q6ZSC3 357 aaKnown RBP17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 DSG4Q86SJ6 1040 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 FAM124AQ86V42 546 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 CACUL1Q86Y37 369 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 ZNF366Q8N895 744 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 GANCQ8TET4 914 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 SKA1Q96BD8 255 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 PGAP3Q96FM1 320 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 PRMT1Q99873 361 aaKnown RBP17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 NAA15Q9BXJ9 866 aaKnown RBP17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 CD93Q9NPY3 652 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 SLC25A13Q9UJS0 675 aa17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 INTS6Q9UL03 887 aaKnown RBP17.62■□□□□ 0.41
TNFRSF4-202ENST00000453580 F8VZ95 297 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 TRIM16O95361 564 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 ADH1BP00325 375 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 ZNF883P0CG24 379 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 AUHQ13825 339 aaKnown RBP17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 SLC25A52Q3SY17 297 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 FSCBQ5H9T9 825 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 ARCQ7LC44 396 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 ZCCHC9Q8N567 271 aaKnown RBP17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 SNX19Q92543 992 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 CNTNAP3BQ96NU0 1288 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 OMDQ99983 421 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 CNTNAP3Q9BZ76 1288 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 PABPC3Q9H361 631 aaKnown RBP17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 EIF2B4Q9UI10 523 aaKnown RBP17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 XPO7Q9UIA9 1087 aaKnown RBP17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 FZD4Q9ULV1 537 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 PCDHB9Q9Y5E1 797 aa17.61■□□□□ 0.41
TNFRSF4-202ENST00000453580 LRRC72A6NJI9 287 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 SIN3BO75182 1162 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 C5AR1P21730 350 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 MAOBP27338 520 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 CXCR3P49682 368 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 SULT1E1P49888 294 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 CDH4P55283 916 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 RNASE9P60153 205 aaKnown RBP17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 KRT83P78385 493 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 DEUP1Q05D60 604 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 ELAVL3Q14576 367 aaKnown RBP17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 CST6Q15828 149 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 STX1AQ16623 288 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 FAM102AQ5T9C2 384 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 CDKAL1Q5VV42 579 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 FBXL22Q6P050 247 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 TRIM72Q6ZMU5 477 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 PIP4P1Q86T03 277 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 DHX40Q8IX18 779 aaKnown RBP17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 DEFB124Q8NES8 71 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 NT5C3BQ969T7 300 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 MYO19Q96H55 970 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 MRGPRX3Q96LB0 322 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 C1orf74Q96LT6 269 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 SPAG5Q96R06 1193 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 NPY6RQ99463 290 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 FBXL12Q9NXK8 326 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 TAB2Q9NYJ8 693 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 AJAP1Q9UKB5 411 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 PCNX2A6NKB5 2137 aa17.6■□□□□ 0.41
TNFRSF4-202ENST00000453580 DFNA5O60443 496 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 PAGE1O75459 146 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 PNMA6AP0CW24 399 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 PDGFRAP16234 1089 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 CDK11BP21127 795 aaKnown RBP17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 CD27P26842 260 aa17.59■□□□□ 0.41
TNFRSF4-202ENST00000453580 ACSL1P33121 698 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms