RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 APOPT1Q96IL0 206 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 SLITRK1Q96PX8 696 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 FAM118BQ9BPY3 351 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 FERMT1Q9BQL6 677 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 KLHL25Q9H0H3 589 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 CAAP1Q9H8G2 361 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 ERVK-11Q9UQG0 969 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 PLXNB2O15031 1838 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 PTPRJQ12913 1337 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 PIAS1O75925 651 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 SLC25A27O95847 323 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 CHEK2O96017 543 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 IL1BP01584 269 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 AQP5P55064 265 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 TUBA4AP68366 448 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 ADGRD1Q6QNK2 874 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 METTL7BQ6UX53 244 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 TTC30AQ86WT1 665 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 TRIM56Q9BRZ2 755 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 MAFO75444 373 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 TPPPO94811 219 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 CDKL1Q00532 357 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 ITGADQ13349 1161 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 TRPC3Q13507 836 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 PGM2L1Q6PCE3 622 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 GPR141Q7Z602 305 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 RHPN2Q8IUC4 686 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 CATSPER1Q8NEC5 780 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 TMEM134Q9H6X4 195 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 VPS45Q9NRW7 570 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 MARCOQ9UEW3 520 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.29e-9■■■■■ 62.4
SYNGAP1-204ENST00000449372 IGKV6-21A0A0C4DH24 114 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 C4BPAP04003 597 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 POLR2EP19388 210 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 ESRRGP62508 458 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 NOMO3P69849 1222 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 LY6KQ17RY6 165 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 TTC39CQ8N584 583 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 TBC1D15Q8TC07 691 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 ACAP3Q96P50 834 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 GPR20Q99678 358 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 ZFYVE28Q9HCC9 887 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 POU2F3Q9UKI9 436 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 NDST2P52849 883 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 SLC43A3Q8NBI5 491 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 GRIN3AQ8TCU5 1115 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 AGO2Q9UKV8 859 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 DNPEPQ9ULA0 475 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 TMX2-CTNND1H3BSU7 103 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 SERPINA6P08185 405 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 HSPA13P48723 471 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 SERPINB9P50453 376 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 CAPSQ13938 189 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 RNASEH2BQ5TBB1 312 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 PDZD8Q8NEN9 1154 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 HIPK3Q9H422 1215 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 CNTNAP2Q9UHC6 1331 aa13.78□□□□□ -0.2
SYNGAP1-204ENST00000449372 A0A0B4J269 797 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 TIMM44O43615 452 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 H6PDO95479 791 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 ENO2P09104 434 aaPredicted RBP13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 JAK1P23458 1154 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 NLRP11P59045 1033 aaKnown RBP13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 ZACNQ401N2 412 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 TIGD2Q4W5G0 525 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 NLRP7Q8WX94 980 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 OLFM1Q99784 485 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 QPCTLQ9NXS2 382 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 PPME1Q9Y570 386 aa13.77□□□□□ -0.2
SYNGAP1-204ENST00000449372 CFAP99D6REC4 459 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 CHRNB1P11230 501 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 VDRP11473 427 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 NELFEP18615 380 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 BMXP51813 675 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 COPAP53621 1224 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 SNX16P57768 344 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 PTK7Q13308 1070 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 PALMDQ9NP74 551 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 ERGIC3Q9Y282 383 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 VNN1O95497 513 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 PGK2P07205 417 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 AOC1P19801 751 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 PSMA2P25787 234 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 STAT5BP51692 787 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 WASHC5Q12768 1159 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 WDR45BQ5MNZ6 344 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 CELF3Q5SZQ8 465 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 DEFB107AQ8IZN7 70 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 OR7G1Q8NGA0 311 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 SEPT1Q8WYJ6 367 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 FAM84AQ96KN4 292 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 NLRP4Q96MN2 994 aa13.77□□□□□ -0.21
SYNGAP1-204ENST00000449372 KLF11O14901 512 aa13.76□□□□□ -0.21
SYNGAP1-204ENST00000449372 GIPC1O14908 333 aa13.76□□□□□ -0.21
SYNGAP1-204ENST00000449372 KLHL2O95198 593 aa13.76□□□□□ -0.21
SYNGAP1-204ENST00000449372 DHRS4L1P0CG22 281 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms