RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 PSD4Q8NDX1 1056 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 GLIS3Q8NEA6 775 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 AFG1LQ8WV93 481 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 STARD8Q92502 1023 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 VWCEQ96DN2 955 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 NOC4LQ9BVI4 516 aaKnown RBP5.68□□□□□ -1.5
FAM60A-202ENST00000448582 COPS7BQ9H9Q2 264 aaPredicted RBP5.68□□□□□ -1.5
FAM60A-202ENST00000448582 ZNF287Q9HBT7 754 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 IL37Q9NZH6 218 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 TMOD2Q9NZR1 351 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 IGSF9Q9P2J2 1179 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 CHRNA9Q9UGM1 479 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 CLCA2Q9UQC9 943 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 PCDHA9Q9Y5H5 950 aa5.68□□□□□ -1.5
FAM60A-202ENST00000448582 UBR3Q6ZT12 1888 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 TOGARAM1Q9Y4F4 1720 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 MAGEB6P1A0A0J9YX57 407 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 KHNYNO15037 678 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 AKR7A2O43488 359 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 PHF2O75151 1096 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 LMNAP02545 664 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 MPOP05164 745 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 HLA-DPA1P20036 260 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 IL10P22301 178 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 CFL1P23528 166 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 GPTP24298 496 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 BUD31P41223 144 aaPredicted RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 NT5C2P49902 561 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 MRPL12P52815 198 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 PNLIPRP1P54315 467 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 VBP1P61758 197 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 GNG11P61952 73 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 GRIN1Q05586 938 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 ZNF543Q08ER8 600 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 ADAM9Q13443 819 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 MAP7Q14244 749 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 DGKDQ16760 1214 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 WHAMMP3Q1A5X7 153 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 CCDC14Q49A88 953 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 GALNT18Q6P9A2 607 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 TRILQ7L0X0 811 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 USP37Q86T82 979 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 CCDC50Q8IVM0 306 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 HERC6Q8IVU3 1022 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 VSTM4Q8IW00 320 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 STT3BQ8TCJ2 826 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 FBXO32Q969P5 355 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 OR1F2PQ96R84 312 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 SNX25Q9H3E2 840 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 ANKZF1Q9H8Y5 726 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 NOD2Q9HC29 1040 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 C12orf4Q9NQ89 552 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 RBM12Q9NTZ6 932 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 COL5A2P05997 1499 aaPredicted RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 SCN7AQ01118 1682 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 PSMD14O00487 310 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 DCLK1O15075 740 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 TRPA1O75762 1119 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 CPT2P23786 658 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 BMP8BP34820 402 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 ARHGAP25P42331 645 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 ALDH1A3P47895 512 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 IRAK1P51617 712 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 ARF3P61204 181 aaPredicted RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 ARF1P84077 181 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 NIPAL4Q0D2K0 466 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 PRSS53Q2L4Q9 553 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 FLYWCH1Q4VC44 716 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 FNDC3BQ53EP0 1204 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 CACHD1Q5VU97 1274 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 BICDL1Q6ZP65 573 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 YTHDF3Q7Z739 585 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 KBTBD6Q86V97 674 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 NKAIN4Q8IVV8 208 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 RBBP8NLQ8NC74 664 aaPredicted RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 ZMIZ2Q8NF64 920 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 KLHL6Q8WZ60 621 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 WNT8AQ9H1J5 351 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 SLC25A18Q9H1K4 315 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 RIMS4Q9H426 269 aaPredicted RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 XKR8Q9H6D3 395 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 CCDC86Q9H6F5 360 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 NRDE2Q9H7Z3 1164 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 CLK4Q9HAZ1 481 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 MAGEE1Q9HCI5 957 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 MYO1AQ9UBC5 1043 aa5.67□□□□□ -1.5
FAM60A-202ENST00000448582 PAIP2BQ9ULR5 123 aaKnown RBP5.67□□□□□ -1.5
FAM60A-202ENST00000448582 MYH3P11055 1940 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 DDX60Q8IY21 1712 aaKnown RBP5.66□□□□□ -1.5
FAM60A-202ENST00000448582 FAM47DPA6NHR8 397 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 KPNA7A9QM74 516 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 H3BQV1 296 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 LINC01387J3KSC0 135 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 IGF2BP3O00425 579 aaKnown RBP eCLIP5.66□□□□□ -1.5
FAM60A-202ENST00000448582 DVL2O14641 736 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 FANCGO15287 622 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 ENTPD3O75355 529 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 PCDH8O95206 1070 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 A1BGP04217 495 aa5.66□□□□□ -1.5
FAM60A-202ENST00000448582 ARAFP10398 606 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms