RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 TXLNAP40222 546 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 DUSP3P51452 185 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ADPRHP54922 357 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ST8SIA6P61647 398 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 CLDN10P78369 228 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 CEBPZQ03701 1054 aaKnown RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 TRIP4Q15650 581 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 LINC00303Q3SY05 128 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ADGRF1Q5T601 910 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 C9orf64Q5T6V5 341 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 SCARA5Q6ZMJ2 495 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 CCDC73Q6ZRK6 1079 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 SND1Q7KZF4 910 aaKnown RBP eCLIP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 RSRC2Q7L4I2 434 aaKnown RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 PRPF39Q86UA1 669 aaKnown RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ZC3H3Q8IXZ2 948 aaKnown RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 OR14C36Q8NHC7 312 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ZNF507Q8TCN5 953 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 HPS3Q969F9 1004 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 JAKMIP2Q96AA8 810 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 TTC17Q96AE7 1141 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 CYFIP2Q96F07 1278 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 MYO19Q96H55 970 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 CCNL2Q96S94 520 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 IRX2Q9BZI1 471 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ZSCAN16Q9H4T2 348 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 EVA1BQ9NVM1 165 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ARHGAP20Q9P2F6 1191 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 SATB2Q9UPW6 733 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 DMTF1Q9Y222 760 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 MYLKQ15746 1914 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3DA0A087WVF3 549 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3IA0A087WXS9 549 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3EA0A087X179 549 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3KA0A087X1G2 549 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3FA6NER0 549 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3LB9A6J9 549 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 SDC3O75056 442 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 CLSTN1O94985 981 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ADH1BP00325 375 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 C4BPAP04003 597 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ASLP04424 464 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 RPN1P04843 607 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3HP0C7X1 549 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ALPPL2P10696 532 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ITGB6P18564 788 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 C5AR1P21730 350 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 NASPP49321 788 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 CYP2J2P51589 502 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 PRSS12P56730 875 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 EHHADHQ08426 723 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 INCA1Q0VD86 236 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 CLN3Q13286 438 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 BIRC3Q13489 604 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 PKP1Q13835 747 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 STAT4Q14765 748 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ISXQ2M1V0 245 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 SGSM1Q2NKQ1 1148 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3GQ6DHY5 549 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3CQ6IPX1 549 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 EPM2AIP1Q7L775 607 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TMC6Q7Z403 805 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 CLEC14AQ86T13 490 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 MMAAQ8IVH4 418 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TBC1D3Q8IZP1 549 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ARL14Q8N4G2 192 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 AADATQ8N5Z0 425 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 LINC00301Q8NCQ3 95 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TAF4BQ92750 862 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 FAM131CQ96AQ9 280 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 PRR11Q96HE9 360 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ARHGAP9Q9BRR9 750 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 DUSP23Q9BVJ7 150 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 DUSP16Q9BY84 665 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 PANK2Q9BZ23 570 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 UBXN6Q9BZV1 441 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 MTG2Q9H4K7 406 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 OLA1Q9NTK5 396 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 KLHL11Q9NVR0 708 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 CGNQ9P2M7 1197 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 TFIP11Q9UBB9 837 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 HMGXB4Q9UGU5 601 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ATXN7L1Q9ULK2 861 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 HBS1LQ9Y450 684 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 PCDHGA4Q9Y5G9 962 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 ANKRD17O75179 2603 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 UTP20O75691 2785 aaKnown RBP7.36□□□□□ -1.23
LRRC28-203ENST00000447360 CREBBPQ92793 2442 aa7.36□□□□□ -1.23
LRRC28-203ENST00000447360 A0A087X0B3 334 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 EDDM13A0A1B0GTR0 161 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 A0A1W2PNU3 283 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-203ENST00000447360 NEMP2A6NFY4 417 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 PRAMEF26H0Y7S4 382 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 CLIC2O15247 247 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 IRAK2O43187 625 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 SLC7A4O43246 635 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 EFSO43281 561 aa7.35□□□□□ -1.23
LRRC28-203ENST00000447360 RNGTTO60942 597 aaKnown RBP7.35□□□□□ -1.23
LRRC28-203ENST00000447360 GJB6O95452 261 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms