RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 ALFQ53S48 1182 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 PITRM1Q5JRX3 1037 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 ALG14Q96F25 216 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 NUP58Q9BVL2 599 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 MAGEB5Q9BZ81 275 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 BCCIPQ9P287 314 aaKnown RBP eCLIP22.53■■□□□ 1.2
TRAF4-205ENST00000444415 NCDNQ9UBB6 729 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 CAPN11Q9UMQ6 739 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 NUMA1Q14980 2115 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 H0Y626 953 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 ATMINO43313 823 aaPredicted RBP22.52■■□□□ 1.2
TRAF4-205ENST00000444415 PLEKP08567 350 aaPredicted RBP22.52■■□□□ 1.2
TRAF4-205ENST00000444415 SDC4P31431 198 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 KLHL30Q0D2K2 578 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 PLEKHG6Q3KR16 790 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 RABGAP1LQ5R372 815 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 TTC39BQ5VTQ0 682 aaPredicted RBP22.52■■□□□ 1.2
TRAF4-205ENST00000444415 SDE2Q6IQ49 451 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.52■■□□□ 1.2
TRAF4-205ENST00000444415 ZNF557Q8N988 423 aaPredicted RBP22.52■■□□□ 1.2
TRAF4-205ENST00000444415 SELENOOQ9BVL4 669 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 ZNF212Q9UDV6 495 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 RAB23Q9ULC3 237 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 ITIH6Q6UXX5 1313 aa22.52■■□□□ 1.2
TRAF4-205ENST00000444415 IGLV3-10A0A075B6K4 115 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 RETP07949 1114 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 USP39Q53GS9 565 aaKnown RBP22.51■■□□□ 1.19
TRAF4-205ENST00000444415 PMS2CLQ68D20 193 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 SERPINA13PQ6UXR4 307 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 SND1Q7KZF4 910 aaKnown RBP eCLIP22.51■■□□□ 1.19
TRAF4-205ENST00000444415 STRADAQ7RTN6 431 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 CPLX3Q8WVH0 158 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 C1orf74Q96LT6 269 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 MCEEQ96PE7 176 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 MTG2Q9H4K7 406 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 NEU3Q9UQ49 428 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 OR51B4Q9Y5P0 310 aa22.51■■□□□ 1.19
TRAF4-205ENST00000444415 DRGXA6NNA5 263 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 AP5Z1O43299 807 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 CCP110O43303 1012 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 EPN2O95208 641 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 EPHX1P07099 455 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 C7P10643 843 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 POLR2EP19388 210 aaKnown RBP22.5■■□□□ 1.19
TRAF4-205ENST00000444415 ZBED6P86452 979 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 MTA1Q13330 715 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 CAMK2GQ13555 558 aaPredicted RBP22.5■■□□□ 1.19
TRAF4-205ENST00000444415 FNDC3BQ53EP0 1204 aaKnown RBP22.5■■□□□ 1.19
TRAF4-205ENST00000444415 DNAJC24Q6P3W2 148 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 PGBD3Q8N328 593 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 CCDC185Q8N715 623 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 FAM172AQ8WUF8 416 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 SYN2Q92777 582 aaPredicted RBP22.5■■□□□ 1.19
TRAF4-205ENST00000444415 HAPLN3Q96S86 360 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 HINFPQ9BQA5 517 aa22.5■■□□□ 1.19
TRAF4-205ENST00000444415 KIAA1522Q9P206 1035 aaPredicted RBP22.5■■□□□ 1.19
TRAF4-205ENST00000444415 E9PAM4 449 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 GZMAP12544 262 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 GPD1P21695 349 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 SPEM2Q0P670 501 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 MAMLD1Q13495 774 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 MANEALQ5VSG8 457 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 PLEKHA7Q6IQ23 1121 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 KIAA2013Q8IYS2 634 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 VCPIP1Q96JH7 1222 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 TRIM7Q9C029 511 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 MPP6Q9NZW5 540 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 GMEB2Q9UKD1 530 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 TBC1D30Q9Y2I9 924 aa22.49■■□□□ 1.19
TRAF4-205ENST00000444415 IGHV1OR15-9A0A0B4J2B8 117 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 FAM72CH0Y354 149 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 ATP5BP06576 529 aaKnown RBP22.48■■□□□ 1.19
TRAF4-205ENST00000444415 CASP14P31944 242 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 ADRA1BP35368 520 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 STK19P49842 368 aaPredicted RBP22.48■■□□□ 1.19
TRAF4-205ENST00000444415 ZNF143P52747 638 aaPredicted RBP22.48■■□□□ 1.19
TRAF4-205ENST00000444415 PLK1P53350 603 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 ZNF252P-AS1Q0IIN9 211 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 STARD3Q14849 445 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 FAM72AQ5TYM5 149 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 FAM72DQ6L9T8 149 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 FAM72BQ86X60 149 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 PRSS16Q9NQE7 514 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 PLA2G4CQ9UP65 541 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 ERVW-1Q9UQF0 538 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 PAXBP1Q9Y5B6 917 aa22.48■■□□□ 1.19
TRAF4-205ENST00000444415 CLDN11O75508 207 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 FTLP02792 175 aaPredicted RBP22.47■■□□□ 1.19
TRAF4-205ENST00000444415 CDH4P55283 916 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 CCDC6Q16204 474 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 TMPRSS6Q8IU80 811 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 LOXL4Q96JB6 756 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 RPL10LQ96L21 214 aaKnown RBP22.47■■□□□ 1.19
TRAF4-205ENST00000444415 ISCUQ9H1K1 167 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 ARRDC1-AS1Q9H2J1 176 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 TMEM51Q9NW97 253 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 USP36Q9P275 1121 aaKnown RBP22.47■■□□□ 1.19
TRAF4-205ENST00000444415 ARHGAP20Q9P2F6 1191 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 SLCO3A1Q9UIG8 710 aa22.47■■□□□ 1.19
TRAF4-205ENST00000444415 CYP8B1Q9UNU6 501 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms