RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 LILRB5O75023 590 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 LRIG2O94898 1065 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 LCA5LO95447 670 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 MIPP30301 263 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 CXCL12P48061 93 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 FNTBP49356 437 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 CCR3P51677 355 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 SLC25A11Q02978 314 aaKnown RBP13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 SRSF5Q13243 272 aaKnown RBP13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 ZNF234Q14588 700 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 CRY1Q16526 586 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 PITRM1Q5JRX3 1037 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 MBLAC2Q68D91 279 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 DCUN1D2Q6PH85 259 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 NIPA2Q8N8Q9 360 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 RPRD1AQ96P16 312 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 DDX50Q9BQ39 737 aaKnown RBP13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 OSBPL2Q9H1P3 480 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 TMEM245Q9H330 911 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 MTG2Q9H4K7 406 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 NOL6Q9H6R4 1146 aaKnown RBP13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 TBC1D30Q9Y2I9 924 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 HCN4Q9Y3Q4 1203 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 RAD54BQ9Y620 910 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 R4GN57 208 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 GPR179Q6PRD1 2367 aa13.24□□□□□ -0.29
PDLIM2-212ENST00000443561 A0A0U1RQJ8 604 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 HLA-EP13747 358 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 HOXA6P31267 233 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 PTPN5P54829 565 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 NUMA1Q14980 2115 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 PLEKHG6Q3KR16 790 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 ZNF528Q3MIS6 628 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 TFAP2DQ7Z6R9 452 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 VPS36Q86VN1 386 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 RASSF3Q86WH2 238 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 ABCA7Q8IZY2 2146 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 ZNF366Q8N895 744 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 SPC24Q8NBT2 197 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 MDGA1Q8NFP4 955 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 WFIKKN2Q8TEU8 576 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 ATRIPQ8WXE1 791 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 TTC17Q96AE7 1141 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 TRIM11Q96F44 468 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 PANX2Q96RD6 677 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 SLC6A17Q9H1V8 727 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 SLC12A6Q9UHW9 1150 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 SALL4Q9UJQ4 1053 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 ANAPC7Q9UJX3 599 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 STON1Q9Y6Q2 735 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 SCINQ9Y6U3 715 aa13.23□□□□□ -0.29
PDLIM2-212ENST00000443561 A0A0D9SEW6 157 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 TMEM253P0C7T8 217 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 GLDCP23378 1020 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 NTSR1P30989 418 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 NBL1P41271 181 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 STK19P49842 368 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 PLK1P53350 603 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 CDH4P55283 916 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 CDH18Q13634 790 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 EIF4HQ15056 248 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 RABGAP1LQ5R372 815 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 TTC39BQ5VTQ0 682 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 HEATR6Q6AI08 1181 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 SLFN11Q7Z7L1 901 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 AHI1Q8N157 1196 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 OR7D4Q8NG98 312 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 ZNF564Q8TBZ8 553 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 ACDQ96AP0 544 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 VOPP1Q96AW1 172 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 CIPCQ9C0C6 399 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 KLC2Q9H0B6 622 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 PPARGC1AQ9UBK2 798 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 OR12D3Q9UGF7 316 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 PCSK1NQ9UHG2 260 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 MFHAS1Q9Y4C4 1052 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 ARIH1Q9Y4X5 557 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 ACTL7AQ9Y615 435 aa13.22□□□□□ -0.29
PDLIM2-212ENST00000443561 OTOGLQ3ZCN5 2332 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 H0Y626 953 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 HRO43593 1189 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 AKR1B10O60218 316 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 SNAP91O60641 907 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 SRGAP2O75044 1071 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 ZMPSTE24O75844 475 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 MTA2O94776 668 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 CD160O95971 181 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 TPM1P09493 284 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 H2AFZP0C0S5 128 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 C7P10643 843 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 HOXB2P14652 356 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 GABRG2P18507 467 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 ARSEP51690 589 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 COPAP53621 1224 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 TAS2R40P59535 323 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 HSF5Q4G112 596 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 SCYL2Q6P3W7 929 aa13.21□□□□□ -0.29
PDLIM2-212ENST00000443561 H2AFVQ71UI9 128 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms