RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 POPDC2Q9HBU9 364 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 ST7Q9NRC1 585 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 TMEM51Q9NW97 253 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 CNTN6Q9UQ52 1028 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 ERVW-1Q9UQF0 538 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 GPSM3Q9Y4H4 160 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 CEP83Q9Y592 693 aa14.29□□□□□ -0.12
PTPRE-203ENST00000442830 F5H5T6 163 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 URB1O60287 2271 aaKnown RBP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 SIN3BO75182 1162 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 GOT1P17174 413 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 GPD2P43304 727 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 ARRB1P49407 418 aaPredicted RBP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 MARSP56192 900 aaKnown RBP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 ELAVL3Q14576 367 aaKnown RBP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 PITRM1Q5JRX3 1037 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 RABGAP1LQ5R372 815 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 NADSYN1Q6IA69 706 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 PDCD7Q8N8D1 485 aaKnown RBP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 EHBP1Q8NDI1 1231 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 LMO3Q8TAP4 145 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 MYO19Q96H55 970 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 ELF4Q99607 663 aaPredicted RBP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 MIS12Q9H081 205 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 THAP9Q9H5L6 903 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 TOR4AQ9NXH8 423 aa14.28□□□□□ -0.12
PTPRE-203ENST00000442830 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPRE-203ENST00000442830 A0A1B0GTQ1 180 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 GOLGA6L7A0A1B0GV03 622 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 TAF4O00268 1085 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 SLC7A4O43246 635 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 AFPP02771 609 aaKnown RBP14.27□□□□□ -0.13
PTPRE-203ENST00000442830 IGHV4-34P06331 123 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 GLI1P08151 1106 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.13
PTPRE-203ENST00000442830 KRT5P13647 590 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 HNF1BP35680 557 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 GALCP54803 685 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 RPS24P62847 133 aaKnown RBP14.27□□□□□ -0.13
PTPRE-203ENST00000442830 KCNH2Q12809 1159 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 OVGP1Q12889 678 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 ACAP1Q15027 740 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 SMAD1Q15797 465 aaKnown RBP14.27□□□□□ -0.13
PTPRE-203ENST00000442830 DCAF6Q58WW2 860 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 C9orf64Q5T6V5 341 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 FAM46CQ5VWP2 391 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 TTI2Q6NXR4 508 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 NCEH1Q6PIU2 408 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 TAC4Q86UU9 113 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 TMPRSS12Q86WS5 348 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 CHSY1Q86X52 802 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 TRIM59Q8IWR1 403 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 CLEC4CQ8WTT0 213 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 MRGPRX3Q96LB0 322 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 NUCKS1Q9H1E3 243 aaKnown RBP14.27□□□□□ -0.13
PTPRE-203ENST00000442830 GDF3Q9NR23 364 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 ASNSD1Q9NWL6 643 aa14.27□□□□□ -0.13
PTPRE-203ENST00000442830 FASNP49327 2511 aaKnown RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 A0A1B0GVM2 712 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 A0A1W2PP55 124 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 TCAF2A6NFQ2 919 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 FAM47DPA6NHR8 397 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 H0Y8X5 98 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 RNF225M0QZC1 329 aaPredicted RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 PIK3R2O00459 728 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 MID1O15344 667 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 RNASEH2AO75792 299 aaKnown RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 GABBR2O75899 941 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 MOCS2O96007 188 aaPredicted RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 PRKCSHP14314 528 aaPredicted RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 ABCB4P21439 1286 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 TACR2P21452 398 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 CD38P28907 300 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 SLC8A1P32418 973 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 YWHAZP63104 245 aaKnown RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 CCDC15Q0P6D6 951 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 PAK1Q13153 545 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 RRAGAQ7L523 313 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 TMEM110Q86TL2 294 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 IQCHQ86VS3 1027 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 MMAAQ8IVH4 418 aaKnown RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 DHX40Q8IX18 779 aaKnown RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 SCUBE3Q8IX30 993 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 LGI2Q8N0V4 545 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 NOX5Q96PH1 765 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 SPAG5Q96R06 1193 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 ORAI3Q9BRQ5 295 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 SLC4A5Q9BY07 1137 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 ERVMER34-1Q9H9K5 563 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 AASDHPPTQ9NRN7 309 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 MAN1B1Q9UKM7 699 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 RALYQ9UKM9 306 aaKnown RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 INTS6Q9UL03 887 aaKnown RBP14.26□□□□□ -0.13
PTPRE-203ENST00000442830 NAALADL1Q9UQQ1 740 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 BTBD3Q9Y2F9 522 aa14.26□□□□□ -0.13
PTPRE-203ENST00000442830 LAMA5O15230 3695 aa14.25□□□□□ -0.13
PTPRE-203ENST00000442830 KCNU1A8MYU2 1149 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms