RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ST8SIA6P61647 398 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 ARHGAP8P85298 464 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 FANCCQ00597 558 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 MTA1Q13330 715 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 CAMK2GQ13555 558 aaPredicted RBP14.17□□□□□ -0.14
LTBR-202ENST00000440421 CDO1Q16878 200 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 PLEKHG6Q3KR16 790 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 RAB6CQ53S08 254 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 LYSMD4Q5XG99 296 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 SLC36A4Q6YBV0 504 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 FAM131BQ86XD5 332 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 PHF13Q86YI8 300 aaPredicted RBP14.17□□□□□ -0.14
LTBR-202ENST00000440421 OR2T3Q8NH03 318 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 RXFP2Q8WXD0 754 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 SIPA1Q96FS4 1042 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 RAB6CQ9H0N0 254 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 PRSS16Q9NQE7 514 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 RXFP3Q9NSD7 469 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 CDV3Q9UKY7 258 aaKnown RBP14.17□□□□□ -0.14
LTBR-202ENST00000440421 ERVW-1Q9UQF0 538 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 PAXBP1Q9Y5B6 917 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 CKAP5Q14008 2032 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 ATXN2Q99700 1313 aaKnown RBP14.16□□□□□ -0.14
LTBR-202ENST00000440421 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.16□□□□□ -0.14
LTBR-202ENST00000440421 A0A1W2PQC6 194 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 GOLGA6L19H0YKK7 550 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 AP5Z1O43299 807 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 NDUFS2O75306 463 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 ACADMP11310 421 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 KRT3P12035 628 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 TNFAIP3P21580 790 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 SDC4P31431 198 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 ZNF177Q13360 481 aaPredicted RBP14.16□□□□□ -0.14
LTBR-202ENST00000440421 NR1I3Q14994 352 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 ASIC2Q16515 512 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 C15orf59Q2T9L4 293 aaPredicted RBP14.16□□□□□ -0.14
LTBR-202ENST00000440421 SKOR2Q2VWA4 1001 aaPredicted RBP14.16□□□□□ -0.14
LTBR-202ENST00000440421 SH3PXD2AQ5TCZ1 1133 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 RNF219Q5W0B1 726 aaPredicted RBP14.16□□□□□ -0.14
LTBR-202ENST00000440421 CXorf57Q6NSI4 855 aaKnown RBP14.16□□□□□ -0.14
LTBR-202ENST00000440421 ARCQ7LC44 396 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 IRF2BP2Q7Z5L9 587 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 OR52K2Q8NGK3 314 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 MYO19Q96H55 970 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 RPL10LQ96L21 214 aaKnown RBP14.16□□□□□ -0.14
LTBR-202ENST00000440421 MRGPRX3Q96LB0 322 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 SELENOOQ9BVL4 669 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 ITM2CQ9NQX7 267 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 MYO6Q9UM54 1294 aa14.16□□□□□ -0.14
LTBR-202ENST00000440421 NUP205Q92621 2012 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 TMCO5BA8MYB1 307 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 TTC34A8MYJ7 566 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 PATE3B3GLJ2 98 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 FOXD2O60548 495 aaPredicted RBP14.15□□□□□ -0.14
LTBR-202ENST00000440421 SRGAP2O75044 1071 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 CNTN5O94779 1100 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 CALB1P05937 261 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 ITPKAP23677 461 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 CD6P30203 668 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 RFC1P35251 1148 aaPredicted RBP14.15□□□□□ -0.14
LTBR-202ENST00000440421 STK19P49842 368 aaPredicted RBP14.15□□□□□ -0.14
LTBR-202ENST00000440421 TPMTP51580 245 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 ECT2LQ008S8 904 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 PUM1Q14671 1186 aaKnown RBP eCLIP14.15□□□□□ -0.14
LTBR-202ENST00000440421 CCDC14Q49A88 953 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 ALFQ53S48 1182 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 SFMBT2Q5VUG0 894 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 ACAD10Q6JQN1 1059 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 MON1BQ7L1V2 547 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 BNIPLQ7Z465 357 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 METTL3Q86U44 580 aaKnown RBP14.15□□□□□ -0.14
LTBR-202ENST00000440421 FAM124AQ86V42 546 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 TOE1Q96GM8 510 aaKnown RBP14.15□□□□□ -0.14
LTBR-202ENST00000440421 HSPA12BQ96MM6 686 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 TMEM74BQ9NUR3 256 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 DLL3Q9NYJ7 618 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 USP36Q9P275 1121 aaKnown RBP14.15□□□□□ -0.14
LTBR-202ENST00000440421 SUN2Q9UH99 717 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 SLCO3A1Q9UIG8 710 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 CEP192Q8TEP8 1941 aa14.15□□□□□ -0.14
LTBR-202ENST00000440421 TNRC6BQ9UPQ9 1833 aaKnown RBP14.14□□□□□ -0.15
LTBR-202ENST00000440421 C2CD4BA6NLJ0 364 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 E9PAM4 449 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 SIN3BO75182 1162 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 CLDN11O75508 207 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 ENDOD1O94919 500 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 SRPRAP08240 638 aaKnown RBP14.14□□□□□ -0.15
LTBR-202ENST00000440421 GPD1P21695 349 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 CDH4P55283 916 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 OXCT1P55809 520 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 UBASH3AP57075 661 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 RPS14P62263 151 aaKnown RBP14.14□□□□□ -0.15
LTBR-202ENST00000440421 ZNF33AQ06730 810 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
LTBR-202ENST00000440421 SLC12A1Q13621 1099 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 HNRNPA1L2Q32P51 320 aaKnown RBP14.14□□□□□ -0.15
LTBR-202ENST00000440421 C5orf22Q49AR2 442 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 SPDYCQ5MJ68 293 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 E4F1Q66K89 784 aaPredicted RBP14.14□□□□□ -0.15
LTBR-202ENST00000440421 DNAJC24Q6P3W2 148 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms