RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	RNASEH2A	O75792	299 aa	Known RBP	16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	CDK4	P11802	303 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	ABCB4	P21439	1286 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	SLC8A1	P32418	973 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	HNF1B	P35680	557 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	ADPRH	P54922	357 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	TBX4	P57082	545 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	NXPH1	P58417	271 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	ST8SIA6	P61647	398 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	SEMG2	Q02383	582 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	PITRM1	Q5JRX3	1037 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	C6orf118	Q5T5N4	469 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	KRBA2	Q6ZNG9	492 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	ZNF557	Q8N988	423 aa	Predicted RBP	16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	IRGQ	Q8WZA9	623 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	SLC39A7	Q92504	469 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	NRSN2	Q9GZP1	204 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	GDF3	Q9NR23	364 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	AASDHPPT	Q9NRN7	309 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	SLCO3A1	Q9UIG8	710 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	CFAP46	Q8IYW2	2715 aa		16.82	■□□□□ 0.28
LAMB1-205	ENST00000439976	TARSL2	A2RTX5	802 aa	Known RBP	16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	YKT6	O15498	198 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	LAT	O43561	262 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	RNASEH1	O60930	286 aa	Known RBP	16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	LTF	P02788	710 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	EPB41	P11171	864 aa	Known RBP	16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	RXRG	P48443	463 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	PPP2CB	P62714	309 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	PPP2CA	P67775	309 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	C19orf57	Q0VDD7	668 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	BNIP3	Q12983	259 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	MS4A13	Q5J8X5	152 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	SPATS2	Q86XZ4	545 aa	Known RBP	16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	CFAP52	Q8N1V2	620 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	CARNMT1	Q8N4J0	409 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	SNIP1	Q8TAD8	396 aa	Known RBP	16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	PTPRN2	Q92932	1015 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	CCDC47	Q96A33	483 aa	Known RBP	16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	FAM131C	Q96AQ9	280 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	SLC39A13	Q96H72	371 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	SERAC1	Q96JX3	654 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	OMD	Q99983	421 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	GOLPH3L	Q9H4A5	285 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	XPO7	Q9UIA9	1087 aa	Known RBP	16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	ATM	Q13315	3056 aa		16.81	■□□□□ 0.28
LAMB1-205	ENST00000439976	EDDM13	A0A1B0GTR0	161 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	RNF225	M0QZC1	329 aa	Predicted RBP	16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	TLR4	O00206	839 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	CETN3	O15182	167 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	SRPRA	P08240	638 aa	Known RBP	16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	GOT1	P17174	413 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	DRD3	P35462	400 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	PSMD8	P48556	350 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	METAP1	P53582	386 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	DCAF6	Q58WW2	860 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	DCAF17	Q5H9S7	520 aa	Predicted RBP	16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	APCDD1	Q8J025	514 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	STK40	Q8N2I9	435 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	DQX1	Q8TE96	717 aa	Known RBP	16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	SKA1	Q96BD8	255 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	ERVMER34-1	Q9H9K5	563 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	ARHGAP20	Q9P2F6	1191 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	KIAA1257	Q9ULG3	409 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	AK5	Q9Y6K8	562 aa		16.8	■□□□□ 0.28
LAMB1-205	ENST00000439976	LUC7L3	O95232	432 aa	Known RBP	16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	CALCA	P01258	141 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	PAEP	P09466	180 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	C5AR1	P21730	350 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	PMS1	P54277	932 aa	Known RBP	16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	YWHAE	P62258	255 aa	Known RBP	16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	ECT2L	Q008S8	904 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	SFSWAP	Q12872	951 aa	Known RBP	16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	LRMP	Q12912	555 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	NNT	Q13423	1086 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	CDH18	Q13634	790 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	CNGA2	Q16280	664 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	TCERG1L	Q5VWI1	586 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	TMEM270	Q6UE05	265 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	PCSK4	Q6UW60	755 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	SND1	Q7KZF4	910 aa	Known RBP eCLIP	16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	OR14C36	Q8NHC7	312 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	RFFL	Q8WZ73	363 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	SLC35C1	Q96A29	364 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	RPL10L	Q96L21	214 aa	Known RBP	16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	SPATA32	Q96LK8	384 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	TLR6	Q9Y2C9	796 aa		16.79	■□□□□ 0.28
LAMB1-205	ENST00000439976	SLC16A3	O15427	465 aa	Known RBP	16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	BRINP1	O60477	761 aa		16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	VAV1	P15498	845 aa		16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	BRD2	P25440	801 aa	Known RBP	16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	MZF1	P28698	734 aa	Predicted RBP	16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	PRCP	P42785	496 aa		16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	RPL34	P49207	117 aa	Known RBP	16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	ARRB1	P49407	418 aa	Predicted RBP	16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	STK19	P49842	368 aa	Predicted RBP	16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	ILK	Q13418	452 aa		16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	CACTIN-AS1	Q8N1I8	211 aa		16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	MFSD2A	Q8NA29	543 aa		16.78	■□□□□ 0.28
LAMB1-205	ENST00000439976	KAT5	Q92993	513 aa		16.78	■□□□□ 0.28

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms