RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 KCNU1A8MYU2 1149 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 GLRA3O75311 464 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 DGAT1O75907 488 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 ATE1O95260 518 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 LYPLA2O95372 231 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 ICAM1P05362 532 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 ASPAP45381 313 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 GPR107Q5VW38 600 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 OFCC1Q8IZS5 231 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 PYROXD2Q8N2H3 581 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 TMEM174Q8WUU8 243 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 C12orf43Q96C57 262 aaKnown RBP13.69□□□□□ -0.22
ACTN1-204ENST00000438964 HEXIM2Q96MH2 286 aaKnown RBP13.69□□□□□ -0.22
ACTN1-204ENST00000438964 OMDQ99983 421 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 RTKNQ9BST9 563 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 CDH19Q9H159 772 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 IL1RL2Q9HB29 575 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 PNPLA8Q9NP80 782 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 SNX15Q9NRS6 342 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 SYBUQ9NX95 663 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 PSMD12O00232 456 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-204ENST00000438964 POLR2BP30876 1174 aaKnown RBP13.69□□□□□ -0.22
ACTN1-204ENST00000438964 JAK3P52333 1124 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 CLDN10P78369 228 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 NME3Q13232 169 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 ZNF460Q14592 562 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 PIGGQ5H8A4 983 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 EPGNQ6UW88 154 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 SCUBE3Q8IX30 993 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 DCLK2Q8N568 766 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 PNPLA1Q8N8W4 532 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 GCOM2Q9BZD3 368 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-204ENST00000438964 FAIMQ9NVQ4 179 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 DNAJC28Q9NX36 388 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-204ENST00000438964 CTDP1Q9Y5B0 961 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-204ENST00000438964 PCDHA11Q9Y5I1 949 aa13.69□□□□□ -0.22
ACTN1-204ENST00000438964 PHGDHO43175 533 aaKnown RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 PAPSS1O43252 624 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 MICAL2O94851 1124 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 STBD1O95210 358 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 VAPBO95292 243 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 ZNF26P17031 533 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 NME5P56597 212 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 POTEAQ6S8J7 498 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 TRIM50Q86XT4 487 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 CCNYL1Q8N7R7 359 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 TMEM102Q8N9M5 508 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 FERMT1Q9BQL6 677 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 SORCS3Q9UPU3 1222 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 TMEM221A6NGB7 291 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 K7EPI3 171 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 TRDMT1O14717 391 aaKnown RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 LSM8O95777 96 aaKnown RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 NAGLUP54802 743 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 ACTR2P61160 394 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 YWHAEP62258 255 aaKnown RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 KRT76Q01546 638 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 FSCBQ5H9T9 825 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 TREML2Q5T2D2 321 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 FAM183BPQ6ZVS7 135 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 RAVER1Q8IY67 606 aaKnown RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 LRRC43Q8N309 656 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 BBS5Q8N3I7 341 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 LRRC71Q8N4P6 559 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 THAP11Q96EK4 314 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 RMND5BQ96G75 393 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 SLC45A3Q96JT2 553 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 GATA5Q9BWX5 397 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-204ENST00000438964 PXMP2Q9NR77 195 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 OLAHQ9NV23 265 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 CNTN6Q9UQ52 1028 aa13.68□□□□□ -0.22
ACTN1-204ENST00000438964 ZNF839A8K0R7 811 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 GIPC1O14908 333 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 PIGNO95427 931 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 ZBTB11O95625 1053 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-204ENST00000438964 MT-ND1P03886 318 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 FUCA1P04066 466 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 ME2P23368 584 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 GNA12Q03113 381 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 PTK2BQ14289 1009 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 TGFBIQ15582 683 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 NEDD8Q15843 81 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-204ENST00000438964 ERI1Q8IV48 349 aaKnown RBP13.67□□□□□ -0.22
ACTN1-204ENST00000438964 CHERPQ8IWX8 916 aaKnown RBP13.67□□□□□ -0.22
ACTN1-204ENST00000438964 SNRNP25Q9BV90 132 aaKnown RBP13.67□□□□□ -0.22
ACTN1-204ENST00000438964 ZDHHC2Q9UIJ5 367 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-204ENST00000438964 ADAM23O75077 832 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 RGS20O76081 388 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 ZBTB7AO95365 584 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 H6PDO95479 791 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 C16orf87Q6PH81 154 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 TICAM1Q8IUC6 712 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 MCPH1Q8NEM0 835 aa13.67□□□□□ -0.22
ACTN1-204ENST00000438964 ATP6V0A1Q93050 837 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms