RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PLAUP00749 431 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 T-ENOLP0DO92 83 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 TXNP10599 105 aaKnown RBP3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 TPH1P17752 444 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 TNFRSF1BP20333 461 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 EIF4A1P60842 406 aaKnown RBP3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 RPS16P62249 146 aaKnown RBP3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 B4GALNT1Q00973 533 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 CNGA2Q16280 664 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 MANEAQ5SRI9 462 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 UBAP2Q5T6F2 1119 aaKnown RBP3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 CLEC9AQ6UXN8 241 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 ASCL5Q7RTU5 278 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 PELI3Q8N2H9 469 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 NLRP4Q96MN2 994 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 SCNM1Q9BWG6 230 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 TM2D2Q9BX73 214 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 MLXIPQ9HAP2 919 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 SEMA4BQ9NPR2 832 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 ARL8BQ9NVJ2 186 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 TMEM45AQ9NWC5 275 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZIM2Q9NZV7 527 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 COL20A1Q9P218 1284 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 SEMA5BQ9P283 1151 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 DKK4Q9UBT3 224 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 L1RE1Q9UN81 338 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 EIF2AK4Q9P2K8 1649 aaKnown RBP3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 ADAMTS13Q76LX8 1427 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 LTN1O94822 1766 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZZEF1O43149 2961 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 CEP152O94986 1710 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 PCNX1Q96RV3 2341 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 CELSR3Q9NYQ7 3312 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 GTPBP1O00178 669 aaKnown RBP3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 CELF2O95319 508 aaKnown RBP3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 FGF2P09038 288 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 PDGFRBP09619 1106 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 IL1R1P14778 569 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 EPHX2P34913 555 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 IL6STP40189 918 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 JAK3P52333 1124 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 FMO1Q01740 532 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 CCDC15Q0P6D6 951 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 CLCA4Q14CN2 919 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 FAM57BQ71RH2 274 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 YAF2Q8IY57 180 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 STAG1Q8WVM7 1258 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 SLC25A28Q96A46 364 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 TRMT61AQ96FX7 289 aaKnown RBP3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 FCRL5Q96RD9 977 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 CINPQ9BW66 212 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZCWPW1Q9H0M4 648 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 CHST8Q9H2A9 424 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 TMEM8AQ9HCN3 771 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 MLXIPLQ9NP71 852 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 VPS45Q9NRW7 570 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 DNAJB11Q9UBS4 358 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 VPS51Q9UID3 782 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 SLC27A6Q9Y2P4 619 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 THRAP3Q9Y2W1 955 aaKnown RBP3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 MYO15AQ9UKN7 3530 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 BCL9O00512 1426 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 KIF27Q86VH2 1401 aa3.42□□□□□ -1.86
HMGB1P18-201ENST00000438801 TRPM3Q9HCF6 1732 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 NBEAQ8NFP9 2946 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 SMG1Q96Q15 3661 aaKnown RBP3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 FOXN3O00409 490 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 USP12O75317 370 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 INMTO95050 263 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 TMEM225BP0DP42 221 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 BTF3P20290 206 aaKnown RBP3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 RBL1P28749 1068 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 GALNSP34059 522 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 COPAP53621 1224 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 EPHB1P54762 984 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 ANAPC15P60006 121 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 WDR5P61964 334 aaKnown RBP3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 KCNAB1Q14722 419 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 PLAG1Q6DJT9 500 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 GRHL2Q6ISB3 625 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 MZT2AQ6P582 158 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 DLK2Q6UY11 383 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 TFAP2DQ7Z6R9 452 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 P3H2Q8IVL5 708 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 BCAS4Q8TDM0 211 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 ATOH1Q92858 354 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZDHHC12Q96GR4 267 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZNF333Q96JL9 665 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 CTAGE1Q96RT6 745 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 AGO4Q9HCK5 861 aaKnown RBP3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 HACL1Q9UJ83 578 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 ITGB1BP2Q9UKP3 347 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 PROCRQ9UNN8 238 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 SIRT4Q9Y6E7 314 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 PLXNA3P51805 1871 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 NOTCH1P46531 2555 aa3.41□□□□□ -1.86
HMGB1P18-201ENST00000438801 DICER1Q9UPY3 1922 aaKnown RBP3.4□□□□□ -1.86
HMGB1P18-201ENST00000438801 USP54Q70EL1 1684 aa3.4□□□□□ -1.86
HMGB1P18-201ENST00000438801 hCG_2014768A0A024R1R8 64 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms