RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 WHAMMP3Q1A5X7 153 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SLC5A9Q2M3M2 681 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 PRSS36Q5K4E3 855 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 BRMS1LQ5PSV4 323 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 STXBP5Q5T5C0 1151 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 FAM72AQ5TYM5 149 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 FAM72DQ6L9T8 149 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 MFSD7Q6UXD7 560 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 TMC5Q6UXY8 1006 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SPOCD1Q6ZMY3 1216 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 GRASPQ7Z6J2 395 aaPredicted RBP7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 TADA2BQ86TJ2 420 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 FAM72BQ86X60 149 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SLC13A5Q86YT5 568 aaPredicted RBP7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 PSTKQ8IV42 348 aaKnown RBP7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 PYROXD2Q8N2H3 581 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 EFHBQ8N7U6 833 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 LRRN4CLQ8ND94 238 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SHKBP1Q8TBC3 707 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 TCEAL4Q96EI5 215 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SERPINB11Q96P15 392 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 CDK5RAP1Q96SZ6 601 aaKnown RBP7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 CARD6Q9BX69 1037 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 HEMGNQ9BXL5 484 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SLC46A2Q9BY10 475 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 TKTL2Q9H0I9 626 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 ATXN3LQ9H3M9 355 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 DHX35Q9H5Z1 703 aaKnown RBP7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 WDCPQ9H6R7 721 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SFXN1Q9H9B4 322 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 PCDH18Q9HCL0 1135 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 ASAH2Q9NR71 780 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 GKN1Q9NS71 199 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 LMCD1Q9NZU5 365 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 RNF14Q9UBS8 474 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 XPO7Q9UIA9 1087 aaKnown RBP7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 RASAL2Q9UJF2 1139 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 DNMT3LQ9UJW3 386 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 AP4E1Q9UPM8 1137 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 NR2E1Q9Y466 385 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 SNX10Q9Y5X0 201 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 MTCH2Q9Y6C9 303 aa7.28□□□□□ -1.24
LSM3P3-201ENST00000436601 hCG_1818297A0A087WSY0 165 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 GREM1O60565 184 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PAGE1O75459 146 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 FGF19O95750 216 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 KLKB1P03952 638 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 HMBSP08397 361 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ATF4P18848 351 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 HDCP19113 662 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 CDC25CP30307 473 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PTPN7P35236 360 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 SOX18P35713 384 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 KCNQ1P51787 676 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 KPNA1P52294 538 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 CDH6P55285 790 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ZXDBP98169 803 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 RING1Q06587 406 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 SEMA3BQ13214 749 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 KLF1Q13351 362 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 KRT81Q14533 505 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 SIX1Q15475 284 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 TEAD2Q15562 447 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PPP2R5EQ16537 467 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 LONRF2Q1L5Z9 754 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ARL13BQ3SXY8 428 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ZFYVE27Q5T4F4 411 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 SEL1L2Q5TEA6 688 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PEAR1Q5VY43 1037 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ANKRD54Q6NXT1 300 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 SYCE2Q6PIF2 218 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ELMSAN1Q6PJG2 1045 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PDZD4Q76G19 769 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ZNF572Q7Z3I7 529 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ADAT2Q7Z6V5 191 aaKnown RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 CCDC50Q8IVM0 306 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ZNF683Q8IZ20 524 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PQLC3Q8N755 202 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ARL14EPQ8N8R7 260 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 MAB21L3Q8N8X9 362 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 LEMD2Q8NC56 503 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PCDH19Q8TAB3 1148 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 SMG7Q92540 1137 aaKnown RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 MRPS31Q92665 395 aaKnown RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 PPP2R3CQ969Q6 453 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 WBP2Q969T9 261 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 FAF2Q96CS3 445 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 RBM41Q96IZ5 413 aaKnown RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 ZSWIM3Q96MP5 696 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 HAPLN3Q96S86 360 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 GAS2L1Q99501 681 aaPredicted RBP7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 APOL5Q9BWW9 433 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 AP1M1Q9BXS5 423 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 CALN1Q9BXU9 219 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 OSBPL8Q9BZF1 889 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 GSX2Q9BZM3 304 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 NACA2Q9H009 215 aa7.27□□□□□ -1.25
LSM3P3-201ENST00000436601 OSBPL2Q9H1P3 480 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms