RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 NUP205Q92621 2012 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 IGLV3-10A0A075B6K4 115 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 FAM170AA1A519 330 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 MAP3K13O43283 966 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 SRPRAP08240 638 aaKnown RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 HLA-EP13747 358 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 SDHBP21912 280 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 RDXP35241 583 aaKnown RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 PBX1P40424 430 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 PRKCIP41743 596 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 PTPN9P43378 593 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 NSFP46459 744 aaKnown RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 VASPP50552 380 aaPredicted RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 IRAK1P51617 712 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 ATXN1P54253 815 aaKnown RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 FANCCQ00597 558 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 CREB5Q02930 508 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.36
EXT1-202ENST00000436216 CIR1Q86X95 450 aaPredicted RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 APCDD1Q8J025 514 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 EMC1Q8N766 993 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 C3orf20Q8ND61 904 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 OR2T3Q8NH03 318 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 JOSD2Q8TAC2 188 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 ERLEC1Q96DZ1 483 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 SIPA1Q96FS4 1042 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 RPRD1AQ96P16 312 aaPredicted RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 HAPLN3Q96S86 360 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 SIK2Q9H0K1 926 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 FBRSQ9HAH7 460 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 CD93Q9NPY3 652 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 PRSS16Q9NQE7 514 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 VANGL2Q9ULK5 521 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 OR51B4Q9Y5P0 310 aa12.78□□□□□ -0.36
EXT1-202ENST00000436216 TNRC6BQ9UPQ9 1833 aaKnown RBP12.78□□□□□ -0.36
EXT1-202ENST00000436216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 LRRC53A6NM62 1247 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 SIGLEC16A6NMB1 481 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 AP5Z1O43299 807 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 CLDN11O75508 207 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 MOCS3O95396 460 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 SERPINC1P01008 464 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 CALB1P05937 261 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 KRT3P12035 628 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 PDGFRAP16234 1089 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 MZF1P28698 734 aaPredicted RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 RFC1P35251 1148 aaPredicted RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 PTGER3P43115 390 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 TPMTP51580 245 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 LIMK1P53667 647 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 CDH4P55283 916 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 TPM4P67936 248 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 ECT2LQ008S8 904 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 PUM1Q14671 1186 aaKnown RBP eCLIP12.77□□□□□ -0.37
EXT1-202ENST00000436216 SF3A2Q15428 464 aaKnown RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 CCDC6Q16204 474 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 RSPO4Q2I0M5 234 aaPredicted RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 HNRNPA1L2Q32P51 320 aaKnown RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 PEAR1Q5VY43 1037 aaPredicted RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 ACAD10Q6JQN1 1059 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 STRADAQ7RTN6 431 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 TMEFF1Q8IYR6 380 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 OR52K2Q8NGK3 314 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 NETO1Q8TDF5 533 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 RXFP2Q8WXD0 754 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 PRCCQ92733 491 aaPredicted RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 ZNF419Q96HQ0 510 aaPredicted RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 FEM1AQ9BSK4 669 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 TMPRSS4Q9NRS4 437 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 WSB2Q9NYS7 404 aaPredicted RBP12.77□□□□□ -0.37
EXT1-202ENST00000436216 CYP8B1Q9UNU6 501 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 ERVW-1Q9UQF0 538 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 ITIH6Q6UXX5 1313 aa12.77□□□□□ -0.37
EXT1-202ENST00000436216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.76□□□□□ -0.37
EXT1-202ENST00000436216 GDF9O60383 454 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 CNTN5O94779 1100 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 CD6P30203 668 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 OXTRP30559 389 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 HOXD12P35452 270 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 GGCXP38435 758 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 DPP6P42658 865 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 CTSOP43234 321 aaPredicted RBP12.76□□□□□ -0.37
EXT1-202ENST00000436216 DHPSP49366 369 aaPredicted RBP12.76□□□□□ -0.37
EXT1-202ENST00000436216 ST8SIA6P61647 398 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 RPS14P62263 151 aaKnown RBP12.76□□□□□ -0.37
EXT1-202ENST00000436216 NRG1Q02297 640 aaPredicted RBP12.76□□□□□ -0.37
EXT1-202ENST00000436216 RPL6Q02878 288 aaKnown RBP12.76□□□□□ -0.37
EXT1-202ENST00000436216 ZBTB16Q05516 673 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 SULT2A1Q06520 285 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 ZNF177Q13360 481 aaPredicted RBP12.76□□□□□ -0.37
EXT1-202ENST00000436216 SH3PXD2AQ5TCZ1 1133 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 E4F1Q66K89 784 aaPredicted RBP12.76□□□□□ -0.37
EXT1-202ENST00000436216 PPP1R2P3Q6NXS1 205 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 WDR59Q6PJI9 974 aa12.76□□□□□ -0.37
EXT1-202ENST00000436216 CYP2U1Q7Z449 544 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms