RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RILPQ96NA2 401 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 SNX25Q9H3E2 840 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 OCEL1Q9H607 264 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 NUP205Q92621 2012 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 BTBD19C9JJ37 291 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 M0QYT0 321 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 NRP1O14786 923 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 PSMG1O95456 288 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 CACNA2D1P54289 1103 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 TUBB3Q13509 450 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 FAM91A1Q658Y4 838 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 LRRC8BQ6P9F7 803 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 TIFABQ6ZNK6 161 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 MARK2Q7KZI7 788 aaKnown RBP10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 B3GALNT2Q8NCR0 500 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 PPFIBP2Q8ND30 876 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 APPL2Q8NEU8 664 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 NPLOC4Q8TAT6 608 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 HIC2Q96JB3 615 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 ZNF408Q9H9D4 720 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 TMEM216Q9P0N5 145 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 RPL26L1Q9UNX3 145 aaKnown RBP10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 PLA2G4CQ9UP65 541 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 DNAJC16Q9Y2G8 782 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 ZNF711Q9Y462 761 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 E7ENQ6 273 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 FYNP06241 537 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 ITGA2BP08514 1039 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 CYP2C9P11712 490 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 SKIP12755 728 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 HOXD8P13378 290 aaPredicted RBP10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 ATP6V1C1P21283 382 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 SERPINB9P50453 376 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 PGGT1BP53609 377 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 LILRA4P59901 499 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 MYBPC3Q14896 1274 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 PCLAFQ15004 111 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 VWA5B1Q5TIE3 1220 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 C10orf107Q8IVU9 208 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 MOCOSQ96EN8 888 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 ZNF333Q96JL9 665 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 ZFP42Q96MM3 310 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 TUBB6Q9BUF5 446 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 WWP1Q9H0M0 922 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 TMEM30AQ9NV96 361 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 MORF4L1Q9UBU8 362 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 RALGAPA2Q2PPJ7 1873 aa10.68□□□□□ -0.7
CLSTN1-203ENST00000435891 HNRNPRO43390 633 aaKnown RBP10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 PLIN3O60664 434 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 AFF1P51825 1210 aaKnown RBP10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 UBXN11Q5T124 520 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 ARCQ7LC44 396 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 GPR142Q7Z601 462 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SLC25A41Q8N5S1 370 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 POU5F2Q8N7G0 328 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 OR52K1Q8NGK4 314 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SH3TC2Q8TF17 1288 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 HSFY1Q96LI6 401 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 OXCT2Q9BYC2 517 aaPredicted RBP10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SHCBP1LQ9BZQ2 653 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 PNPOQ9NVS9 261 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 NVLO15381 856 aaKnown RBP10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 TREHO43280 583 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 C6orf222P0C671 652 aaPredicted RBP10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 LDLRAD1Q5T700 205 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 C4orf22Q6V702 233 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 KBTBD2Q8IY47 623 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 TNS4Q8IZW8 715 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 PLD6Q8N2A8 252 aaKnown RBP10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 PPP1R14CQ8TAE6 165 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 ZFAND2BQ8WV99 257 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SLC10A4Q96EP9 437 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 MS4A4AQ96JQ5 239 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 PANX3Q96QZ0 392 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 NPY6RQ99463 290 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 THTPAQ9BU02 230 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 ACSS2Q9NR19 701 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 THAP1Q9NVV9 213 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 GDAP2Q9NXN4 497 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SNX10Q9Y5X0 201 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 XPO1O14980 1071 aaKnown RBP10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 BIRC5O15392 142 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SORBS2O94875 1100 aaKnown RBP10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 FAM163BP0C2L3 166 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 FDFT1P37268 417 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SNX16P57768 344 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 USP46P62068 366 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 CCNA1P78396 465 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SNX17Q15036 470 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 WSCD1Q658N2 575 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 CLEC20AQ6ZU45 233 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 GPRIN1Q7Z2K8 1008 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 RSPH3Q86UC2 560 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 NT5C3BQ969T7 300 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 AGAP2Q99490 1192 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 SORT1Q99523 831 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 TINF2Q9BSI4 451 aa10.67□□□□□ -0.7
CLSTN1-203ENST00000435891 TSPYL2Q9H2G4 693 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms