RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 CIR1Q86X95 450 aaPredicted RBP26.33■■□□□ 1.81
SMDT1-202ENST00000422252 DHX40Q8IX18 779 aaKnown RBP26.33■■□□□ 1.81
SMDT1-202ENST00000422252 GPT2Q8TD30 523 aa26.33■■□□□ 1.81
SMDT1-202ENST00000422252 GBP4Q96PP9 640 aa26.33■■□□□ 1.81
SMDT1-202ENST00000422252 STK33Q9BYT3 514 aa26.33■■□□□ 1.81
SMDT1-202ENST00000422252 ZDHHC5Q9C0B5 715 aa26.33■■□□□ 1.81
SMDT1-202ENST00000422252 C6orf106Q9H6K1 298 aaPredicted RBP26.33■■□□□ 1.81
SMDT1-202ENST00000422252 RRN3Q9NYV6 651 aa26.33■■□□□ 1.81
SMDT1-202ENST00000422252 EIF2B4Q9UI10 523 aaKnown RBP26.33■■□□□ 1.81
SMDT1-202ENST00000422252 SCML1Q9UN30 329 aa26.33■■□□□ 1.81
SMDT1-202ENST00000422252 A0A1B0GVM2 712 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 TCAF2A6NFQ2 919 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 TTC34A8MYJ7 566 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 M0QYT0 321 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 BCAT2O15382 392 aaPredicted RBP26.32■■□□□ 1.8
SMDT1-202ENST00000422252 RNASEH1O60930 286 aaKnown RBP26.32■■□□□ 1.8
SMDT1-202ENST00000422252 SEMA4FO95754 770 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 MATKP42679 507 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 GABRB2P47870 512 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 GRIK2Q13002 908 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 TAF3Q5VWG9 929 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 RNF219Q5W0B1 726 aaPredicted RBP26.32■■□□□ 1.8
SMDT1-202ENST00000422252 SNX19Q92543 992 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 RPRD1AQ96P16 312 aaPredicted RBP26.32■■□□□ 1.8
SMDT1-202ENST00000422252 ITIH6Q6UXX5 1313 aa26.32■■□□□ 1.8
SMDT1-202ENST00000422252 TARSL2A2RTX5 802 aaKnown RBP26.31■■□□□ 1.8
SMDT1-202ENST00000422252 F8VZ95 297 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 PDGFRAP16234 1089 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 AUHQ13825 339 aaKnown RBP26.31■■□□□ 1.8
SMDT1-202ENST00000422252 C9orf64Q5T6V5 341 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 CDKAL1Q5VV42 579 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 ERICH1Q86X53 443 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 IGSF8Q969P0 613 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 C18orf8Q96DM3 657 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 NPY6RQ99463 290 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 VPS16Q9H269 839 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 PABPC3Q9H361 631 aaKnown RBP26.31■■□□□ 1.8
SMDT1-202ENST00000422252 SGK2Q9HBY8 427 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.31■■□□□ 1.81e-7■■■■□ 24.3
SMDT1-202ENST00000422252 SLCO3A1Q9UIG8 710 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 STAP1Q9ULZ2 295 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 NCKAP1Q9Y2A7 1128 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 HS3ST4Q9Y661 456 aa26.31■■□□□ 1.8
SMDT1-202ENST00000422252 EDDM13A0A1B0GTR0 161 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 GJB3O75712 270 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 SCNN1AP37088 669 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 OXCT1P55809 520 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 RNASE9P60153 205 aaKnown RBP26.3■■□□□ 1.8
SMDT1-202ENST00000422252 CENPCQ03188 943 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 SULT2A1Q06520 285 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 SLC14A1Q13336 389 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 OTUD1Q5VV17 481 aaPredicted RBP26.3■■□□□ 1.8
SMDT1-202ENST00000422252 USP30Q70CQ3 517 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 NOP9Q86U38 636 aaKnown RBP26.3■■□□□ 1.8
SMDT1-202ENST00000422252 C1orf216Q8TAB5 229 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 RPL10LQ96L21 214 aaKnown RBP26.3■■□□□ 1.8
SMDT1-202ENST00000422252 VANGL2Q9ULK5 521 aa26.3■■□□□ 1.8
SMDT1-202ENST00000422252 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.3■■□□□ 1.8
SMDT1-202ENST00000422252 TPRP12270 2363 aaKnown RBP26.3■■□□□ 1.8
SMDT1-202ENST00000422252 PAGE1O75459 146 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 LSM8O95777 96 aaKnown RBP26.29■■□□□ 1.8
SMDT1-202ENST00000422252 TPM2P07951 284 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 CD59P13987 128 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 MZF1P28698 734 aaPredicted RBP26.29■■□□□ 1.8
SMDT1-202ENST00000422252 SULT1E1P49888 294 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 PLK1P53350 603 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 SFSWAPQ12872 951 aaKnown RBP26.29■■□□□ 1.8
SMDT1-202ENST00000422252 KRT31Q15323 416 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 FAM102AQ5T9C2 384 aaPredicted RBP26.29■■□□□ 1.8
SMDT1-202ENST00000422252 CXorf57Q6NSI4 855 aaKnown RBP26.29■■□□□ 1.8
SMDT1-202ENST00000422252 XYLT1Q86Y38 959 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 GANCQ8TET4 914 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 NT5C3BQ969T7 300 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 ADAM33Q9BZ11 813 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 GANQ9H2C0 597 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 PIGVQ9NUD9 493 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 CACNA1EQ15878 2313 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 ACACBO00763 2458 aa26.29■■□□□ 1.8
SMDT1-202ENST00000422252 TFE3P19532 575 aaPredicted RBP26.28■■□□□ 1.8
SMDT1-202ENST00000422252 NNMTP40261 264 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 CXCR3P49682 368 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 STK19P49842 368 aaPredicted RBP26.28■■□□□ 1.8
SMDT1-202ENST00000422252 FOXC1Q12948 553 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 NUMA1Q14980 2115 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 CST6Q15828 149 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 BRMS1LQ5PSV4 323 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 SND1Q7KZF4 910 aaKnown RBP eCLIP26.28■■□□□ 1.8
SMDT1-202ENST00000422252 MMAAQ8IVH4 418 aaKnown RBP26.28■■□□□ 1.8
SMDT1-202ENST00000422252 MSANTD4Q8NCY6 345 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 EPS8L1Q8TE68 723 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 BIRC7Q96CA5 298 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 PGAP3Q96FM1 320 aaPredicted RBP26.28■■□□□ 1.8
SMDT1-202ENST00000422252 PPP1R9BQ96SB3 815 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 WDCPQ9H6R7 721 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 FBXL12Q9NXK8 326 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 ARHGEF38Q9NXL2 777 aa26.28■■□□□ 1.8
SMDT1-202ENST00000422252 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.27■■□□□ 1.8
SMDT1-202ENST00000422252 FAM170AA1A519 330 aa26.27■■□□□ 1.8
SMDT1-202ENST00000422252 MID1O15344 667 aa26.27■■□□□ 1.8
SMDT1-202ENST00000422252 FSBPO95073 299 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms