RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 SGK2Q9HBY8 427 aa18.34■□□□□ 0.53
HDLBP-208ENST00000422080 COX16Q9P0S2 106 aa18.34■□□□□ 0.53
HDLBP-208ENST00000422080 TNRC6BQ9UPQ9 1833 aaKnown RBP18.33■□□□□ 0.53
HDLBP-208ENST00000422080 ITIH6Q6UXX5 1313 aa18.33■□□□□ 0.53
HDLBP-208ENST00000422080 A0A1B0GVM2 712 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 TCAF2A6NFQ2 919 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 M0QYT0 321 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 RNASEH1O60930 286 aaKnown RBP18.33■□□□□ 0.52
HDLBP-208ENST00000422080 SIN3BO75182 1162 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 LSM8O95777 96 aaKnown RBP18.33■□□□□ 0.52
HDLBP-208ENST00000422080 CTSOP43234 321 aaPredicted RBP18.33■□□□□ 0.52
HDLBP-208ENST00000422080 PLK1P53350 603 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 SULT2A1Q06520 285 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 NME3Q13232 169 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 AUHQ13825 339 aaKnown RBP18.33■□□□□ 0.52
HDLBP-208ENST00000422080 C9orf64Q5T6V5 341 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 CDKAL1Q5VV42 579 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 RNF219Q5W0B1 726 aaPredicted RBP18.33■□□□□ 0.52
HDLBP-208ENST00000422080 USP30Q70CQ3 517 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 ERICH1Q86X53 443 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 APCDD1Q8J025 514 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 ZCCHC9Q8N567 271 aaKnown RBP18.33■□□□□ 0.52
HDLBP-208ENST00000422080 GPT2Q8TD30 523 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 NPY6RQ99463 290 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 MTG2Q9H4K7 406 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 C6orf106Q9H6K1 298 aaPredicted RBP18.33■□□□□ 0.52
HDLBP-208ENST00000422080 TAB2Q9NYJ8 693 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
HDLBP-208ENST00000422080 NCKAP1Q9Y2A7 1128 aa18.33■□□□□ 0.52
HDLBP-208ENST00000422080 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 TTC34A8MYJ7 566 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 GJB3O75712 270 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 SEMA4FO95754 770 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 CD59P13987 128 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 NNMTP40261 264 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 CXCR3P49682 368 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 VASPP50552 380 aaPredicted RBP18.32■□□□□ 0.52
HDLBP-208ENST00000422080 GRIK2Q13002 908 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 HNRNPDQ14103 355 aaKnown RBP18.32■□□□□ 0.52
HDLBP-208ENST00000422080 C5orf22Q49AR2 442 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 DHX40Q8IX18 779 aaKnown RBP18.32■□□□□ 0.52
HDLBP-208ENST00000422080 IGSF8Q969P0 613 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 NT5C3BQ969T7 300 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 PGAP3Q96FM1 320 aaPredicted RBP18.32■□□□□ 0.52
HDLBP-208ENST00000422080 RPRD1AQ96P16 312 aaPredicted RBP18.32■□□□□ 0.52
HDLBP-208ENST00000422080 PABPC3Q9H361 631 aaKnown RBP18.32■□□□□ 0.52
HDLBP-208ENST00000422080 OSGEPQ9NPF4 335 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 EIF2B4Q9UI10 523 aaKnown RBP18.32■□□□□ 0.52
HDLBP-208ENST00000422080 SLCO3A1Q9UIG8 710 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 STAP1Q9ULZ2 295 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 HS3ST4Q9Y661 456 aa18.32■□□□□ 0.52
HDLBP-208ENST00000422080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.31■□□□□ 0.52
HDLBP-208ENST00000422080 F8VZ95 297 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 PAGE1O75459 146 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 F9P00740 461 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 TPM2P07951 284 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 PDGFRAP16234 1089 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 RNASE9P60153 205 aaKnown RBP18.31■□□□□ 0.52
HDLBP-208ENST00000422080 ZNF177Q13360 481 aaPredicted RBP18.31■□□□□ 0.52
HDLBP-208ENST00000422080 KRT31Q15323 416 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 OTUD1Q5VV17 481 aaPredicted RBP18.31■□□□□ 0.52
HDLBP-208ENST00000422080 TAF3Q5VWG9 929 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 CXorf57Q6NSI4 855 aaKnown RBP18.31■□□□□ 0.52
HDLBP-208ENST00000422080 IL27RAQ6UWB1 636 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 NOP9Q86U38 636 aaKnown RBP18.31■□□□□ 0.52
HDLBP-208ENST00000422080 ZNF677Q86XU0 584 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 XYLT1Q86Y38 959 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 MSANTD4Q8NCY6 345 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 OR2I1PQ8NGU4 316 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 VPS16Q9H269 839 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 WDCPQ9H6R7 721 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 FBXL12Q9NXK8 326 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 ARHGEF38Q9NXL2 777 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 VANGL2Q9ULK5 521 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.31■□□□□ 0.52
HDLBP-208ENST00000422080 DAAM1Q9Y4D1 1078 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 PAXBP1Q9Y5B6 917 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 CKAP5Q14008 2032 aa18.31■□□□□ 0.52
HDLBP-208ENST00000422080 TPRP12270 2363 aaKnown RBP18.3■□□□□ 0.52
HDLBP-208ENST00000422080 GOLGA6L22H0YM25 854 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 CLDN11O75508 207 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 MZF1P28698 734 aaPredicted RBP18.3■□□□□ 0.52
HDLBP-208ENST00000422080 CST6Q15828 149 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 SLC25A52Q3SY17 297 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 FKBP15Q5T1M5 1219 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 ACBD5Q5T8D3 534 aaPredicted RBP18.3■□□□□ 0.52
HDLBP-208ENST00000422080 SND1Q7KZF4 910 aaKnown RBP eCLIP18.3■□□□□ 0.52
HDLBP-208ENST00000422080 C14orf80Q86SX3 495 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 CIR1Q86X95 450 aaPredicted RBP18.3■□□□□ 0.52
HDLBP-208ENST00000422080 EPS8L1Q8TE68 723 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 GANCQ8TET4 914 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 ALG14Q96F25 216 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 RPL10LQ96L21 214 aaKnown RBP18.3■□□□□ 0.52
HDLBP-208ENST00000422080 FAM129BQ96TA1 746 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 FEM1AQ9BSK4 669 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 ADAM33Q9BZ11 813 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 GANQ9H2C0 597 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 PIGVQ9NUD9 493 aa18.3■□□□□ 0.52
HDLBP-208ENST00000422080 ANO10Q9NW15 660 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms