RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 DHRS4Q9BTZ2 278 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 PCDHA11Q9Y5I1 949 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 GOLGA4Q13439 2230 aaKnown RBP13.68□□□□□ -0.22
MCF2L-213ENST00000421756 DCXO43602 365 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 ETFBP38117 255 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 CHRNA4P43681 627 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 SLC1A6P48664 564 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 ZBTB17Q13105 803 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 FSCN1Q16658 493 aaKnown RBP13.68□□□□□ -0.22
MCF2L-213ENST00000421756 SPDL1Q96EA4 605 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 SMOQ99835 787 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 CYP4F12Q9HCS2 524 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 VANGL2Q9ULK5 521 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 PLA2G4CQ9UP65 541 aa13.68□□□□□ -0.22
MCF2L-213ENST00000421756 RRN3P2A6NIE6 340 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 PIRO00625 290 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 HSPA4LO95757 839 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 WASHC5Q12768 1159 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 HSF5Q4G112 596 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-213ENST00000421756 UBXN11Q5T124 520 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 ATG14Q6ZNE5 492 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 MIB1Q86YT6 1006 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 RYBPQ8N488 228 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-213ENST00000421756 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 NFKBIZQ9BYH8 718 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 ARHGAP39Q9C0H5 1083 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 VRTNQ9H8Y1 702 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 ABI2Q9NYB9 513 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-213ENST00000421756 BFARQ9NZS9 450 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 AK5Q9Y6K8 562 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 THP07101 528 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 CALB2P22676 271 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 ADRA1BP35368 520 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 TIGD5Q53EQ6 642 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 LDLRAD1Q5T700 205 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 IQSEC1Q6DN90 963 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 DENND6AQ8IWF6 608 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 STK32AQ8WU08 396 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 EMID1Q96A84 441 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-213ENST00000421756 QKIQ96PU8 341 aaKnown RBP eCLIP13.67□□□□□ -0.22
MCF2L-213ENST00000421756 PARK7Q99497 189 aaKnown RBP13.67□□□□□ -0.22
MCF2L-213ENST00000421756 FTHL17Q9BXU8 183 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 AGO3Q9H9G7 860 aaKnown RBP13.67□□□□□ -0.22
MCF2L-213ENST00000421756 TK2O00142 265 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 LRIG2O94898 1065 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 POLBP06746 335 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-213ENST00000421756 TPBGLP0DKB5 382 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 NMBRP28336 390 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 GRIK1P39086 918 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 ZBTB6Q15916 424 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 WLSQ5T9L3 541 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 LRRC52Q8N7C0 313 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 TASP1Q9H6P5 420 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 NDFIP2Q9NV92 336 aa13.67□□□□□ -0.22
MCF2L-213ENST00000421756 AIM2O14862 343 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 VAPBO95292 243 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 LTFP02788 710 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 BPGMP07738 259 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 PIRTP0C851 137 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 SLC18A2Q05940 514 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 PDK1Q15118 436 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 C4orf50Q6ZRC1 276 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 FAM35AQ86V20 835 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 WDR75Q8IWA0 830 aaKnown RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 SLC26A7Q8TE54 656 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 NAF1Q96HR8 494 aaKnown RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 PPME1Q9Y570 386 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 ENO4A6NNW6 628 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 XPOTO43592 962 aaKnown RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 PROCP04070 461 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 FYNP06241 537 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 CHRNGP07510 517 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 ZCCHC18P0CG32 403 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 NOS2P35228 1153 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 PBX3P40426 434 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 CUL3Q13618 768 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 SNX30Q5VWJ9 437 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 UCMAQ8WVF2 138 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 PABPC5Q96DU9 382 aaKnown RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 NDNQ99608 321 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 FRMD8P1Q9BZ68 369 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 SNX15Q9NRS6 342 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 APOBEC2Q9Y235 224 aaKnown RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 A0A096LPK6 155 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 SPECC1L-ADORA2AF8WAN1 911 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 TXNDC9O14530 226 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 NDC80O14777 642 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 PPP1R12AO14974 1030 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 GCATO75600 419 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 SERPINB6P35237 376 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 PDCD2Q16342 344 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 BZW1Q7L1Q6 419 aaKnown RBP13.66□□□□□ -0.22
MCF2L-213ENST00000421756 TEKT4Q8WW24 435 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 ARNTL2Q8WYA1 636 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 MYLPFQ96A32 169 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 CERS2Q96G23 380 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms