RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 DNAI1Q9UI46 699 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 FGF10O15520 208 aaPredicted RBP16.17■□□□□ 0.18
DDX55-203ENST00000421670 HOXC11O43248 304 aaPredicted RBP16.17■□□□□ 0.18
DDX55-203ENST00000421670 SRFP11831 508 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 RHOQP17081 205 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 ERCC2P18074 760 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 HTR7P34969 479 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 GJA4P35212 333 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 NUMBP49757 651 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 ZNF135P52742 658 aaPredicted RBP16.17■□□□□ 0.18
DDX55-203ENST00000421670 GAD2Q05329 585 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 IER5LQ5T953 404 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 KAZNQ674X7 775 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 NAIF1Q69YI7 327 aaPredicted RBP16.17■□□□□ 0.18
DDX55-203ENST00000421670 MFN1Q8IWA4 741 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 RCOR2Q8IZ40 523 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 FAF2Q96CS3 445 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 NAPGQ99747 312 aaPredicted RBP16.17■□□□□ 0.18
DDX55-203ENST00000421670 HERPUD2Q9BSE4 406 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 CATSPERBQ9H7T0 1116 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 HEBP1Q9NRV9 189 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 ZNF212Q9UDV6 495 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 DUSP12Q9UNI6 340 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 SORCS3Q9UPU3 1222 aa16.17■□□□□ 0.18
DDX55-203ENST00000421670 hCG_1818297A0A087WSY0 165 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 H0Y626 953 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 TRIM24O15164 1050 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 CLDN11O75508 207 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 LUC7L3O95232 432 aaKnown RBP16.16■□□□□ 0.18
DDX55-203ENST00000421670 HCAR3P49019 387 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 CDH4P55283 916 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 DYNLT1P63172 113 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 ADCY2Q08462 1091 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 NR1H3Q13133 447 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 CDH18Q13634 790 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 TAZQ16635 292 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 TFDP3Q5H9I0 405 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 TJAP1Q5JTD0 557 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 MPP7Q5T2T1 576 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 RNF43Q68DV7 783 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 CHST9Q7L1S5 443 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 RFX6Q8HWS3 928 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 PQLC3Q8N755 202 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 RTL3Q8N8U3 475 aaKnown RBP16.16■□□□□ 0.18
DDX55-203ENST00000421670 NETO2Q8NC67 525 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 OR52K2Q8NGK3 314 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 RNF157Q96PX1 679 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 HEMGNQ9BXL5 484 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 CARD9Q9H257 536 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 TMEM248Q9NWD8 314 aa16.16■□□□□ 0.18
DDX55-203ENST00000421670 F5P12259 2224 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 CTAGE9A4FU28 777 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 DCLK1O15075 740 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 CACNG3O60359 315 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 OR1E1P30953 314 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 FSCBQ5H9T9 825 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 ASTLQ6HA08 431 aaPredicted RBP16.15■□□□□ 0.18
DDX55-203ENST00000421670 CXorf57Q6NSI4 855 aaKnown RBP16.15■□□□□ 0.18
DDX55-203ENST00000421670 VSIG1Q86XK7 387 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 GJD3Q8N144 294 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 NPWQ8N729 165 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.15■□□□□ 0.18
DDX55-203ENST00000421670 DNASE1L2Q92874 299 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 OSBPL8Q9BZF1 889 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 SLC2A4RGQ9NR83 387 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 DNAJC17Q9NVM6 304 aaKnown RBP16.15■□□□□ 0.18
DDX55-203ENST00000421670 SNX12Q9UMY4 172 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 PIAS3Q9Y6X2 628 aa16.15■□□□□ 0.18
DDX55-203ENST00000421670 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.14■□□□□ 0.17
DDX55-203ENST00000421670 ZNF487B1APH4 448 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 TULP3O75386 442 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 CASQ1P31415 396 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 SLC6A11P48066 632 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 COPS2P61201 443 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 MESP2Q0VG99 397 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 ZNF177Q13360 481 aaPredicted RBP16.14■□□□□ 0.17
DDX55-203ENST00000421670 PPP2R5EQ16537 467 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 SEL1L2Q5TEA6 688 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 NCBP2-AS2Q69YL0 99 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 TMCO3Q6UWJ1 677 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 ETFBKMTQ8IXQ9 262 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 PLD5Q8N7P1 536 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 CELF6Q96J87 481 aaKnown RBP16.14■□□□□ 0.17
DDX55-203ENST00000421670 OSBPL9Q96SU4 736 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 MAK16Q9BXY0 300 aaKnown RBP16.14■□□□□ 0.17
DDX55-203ENST00000421670 TRPV5Q9NQA5 729 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 MUTYHQ9UIF7 546 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 TTC28Q96AY4 2481 aa16.14■□□□□ 0.17
DDX55-203ENST00000421670 WASH4PA8MWX3 477 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 MFSD11O43934 449 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 MAP3K6O95382 1288 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 HLA-FP30511 346 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 CD70P32970 193 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 OPRD1P41143 372 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 PFKPQ01813 784 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 KDSRQ06136 332 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 SLC9A4Q6AI14 798 aa16.13■□□□□ 0.17
DDX55-203ENST00000421670 CCDC117Q8IWD4 279 aaPredicted RBP16.13■□□□□ 0.17
DDX55-203ENST00000421670 TP53INP2Q8IXH6 220 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms