RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 TTC17Q96AE7 1141 aa13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 HSPA12BQ96MM6 686 aa13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 CFAP57Q96MR6 1250 aa13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 ARHGEF38Q9NXL2 777 aa13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 ADAM22Q9P0K1 906 aa13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 TMEM59LQ9UK28 342 aa13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 RALGAPA1Q6GYQ0 2036 aa13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
HMGN1P4-201ENST00000419500 THADAQ6YHU6 1953 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 CEP250Q9BV73 2442 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 GDF9O60383 454 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 ADCY5O95622 1261 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 DNTTP04053 509 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 CALB1P05937 261 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 SRPRAP08240 638 aaKnown RBP13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 PDGFRAP16234 1089 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 CD6P30203 668 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 SDC4P31431 198 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 NNMTP40261 264 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 TPMTP51580 245 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 ATP11AP98196 1134 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 ECT2LQ008S8 904 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 IQCB1Q15051 598 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 CDO1Q16878 200 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 PLEKHG6Q3KR16 790 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 LRSAM1Q6UWE0 723 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 LRRC31Q6UY01 552 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 ERMP1Q7Z2K6 904 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 PHLDB2Q86SQ0 1253 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 FAM131BQ86XD5 332 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 SYT12Q8IV01 421 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 DEFB119Q8N690 84 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 FOXJ1Q92949 421 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 IGSF8Q969P0 613 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 AGPAT1Q99943 283 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 RTKNQ9BST9 563 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 EDEM2Q9BV94 578 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 SELENOOQ9BVL4 669 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 CBX8Q9HC52 389 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 USP36Q9P275 1121 aaKnown RBP13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 SUN2Q9UH99 717 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 INTS6Q9UL03 887 aaKnown RBP13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 CKAP5Q14008 2032 aa13.12□□□□□ -0.31
HMGN1P4-201ENST00000419500 A0A1B0GTH6 734 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 A0A1W2PQC6 194 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ANKRD62A6NC57 917 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 LRRC53A6NM62 1247 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 KHNYNO15037 678 aaKnown RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 RNASEH1O60930 286 aaKnown RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 CLDN11O75508 207 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 KRT3P12035 628 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ITPKAP23677 461 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 OXTRP30559 389 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 HOXD12P35452 270 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 NUMBP49757 651 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ATXN1P54253 815 aaKnown RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 SULT2A1Q06520 285 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ZNF33AQ06730 810 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ZSCAN23Q3MJ62 389 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ARL13BQ3SXY8 428 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 TTC31Q49AM3 519 aaPredicted RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 SYCP2LQ5T4T6 812 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ZNF776Q68DI1 518 aaPredicted RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 IL31Q6EBC2 164 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 LUZP1Q86V48 1076 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 APCDD1Q8J025 514 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 KDM1BQ8NB78 822 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 RXFP2Q8WXD0 754 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 TOE1Q96GM8 510 aaKnown RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 RPL10LQ96L21 214 aaKnown RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 PCDHB18PQ96TA0 734 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 NUSAP1Q9BXS6 441 aaKnown RBP13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 MUC3BQ9H195 1237 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ITM2CQ9NQX7 267 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 ERVW-1Q9UQF0 538 aa13.11□□□□□ -0.31
HMGN1P4-201ENST00000419500 LNP1A1A4G5 178 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 MEI4A8MW99 385 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 SLC30A4O14863 429 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 CFIP05156 583 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 DESP17661 470 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 MZF1P28698 734 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 CTSOP43234 321 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 IRAK1P51617 712 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 LIMK1P53667 647 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 CDH4P55283 916 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 GSCP56915 257 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 ZBTB16Q05516 673 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 PTP4A2Q12974 167 aa13.1□□□□□ -0.31
HMGN1P4-201ENST00000419500 ASIC2Q16515 512 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms