RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 PDE2AO00408 941 aaPredicted RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 DCLK1O15075 740 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 TRIM24O15164 1050 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 MFSD11O43934 449 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 ZNF500O60304 480 aaPredicted RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 TBL1XO60907 577 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 LATS1O95835 1130 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 PECAM1P16284 738 aaPredicted RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 PSMC3P17980 439 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 ERCC2P18074 760 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 HOXD9P28356 352 aaPredicted RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 EPHB2P29323 1055 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 CASQ1P31415 396 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 SOX9P48436 509 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 ZP2Q05996 745 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 FCHO2Q0JRZ9 810 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 DHCR24Q15392 516 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 TAZQ16635 292 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 ANKRD20A8PQ5CZ79 823 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 FYB2Q5VWT5 728 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 PAPD7Q5XG87 772 aaKnown RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 NCBP2-AS2Q69YL0 99 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 MTSS1LQ765P7 747 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 B4GALNT4Q76KP1 1039 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 ADAT2Q7Z6V5 191 aaKnown RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 NLRP14Q86W24 1093 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 RFX6Q8HWS3 928 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 PSTKQ8IV42 348 aaKnown RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 MFSD6LQ8IWD5 586 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 SFTPA1Q8IWL2 248 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 CPXM2Q8N436 756 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 UBL4BQ8N7F7 174 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 EXD1Q8NHP7 514 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 AZIN2Q96A70 460 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 FAF2Q96CS3 445 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 CELF6Q96J87 481 aaKnown RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 NCAPGQ9BPX3 1015 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 FAM118BQ9BPY3 351 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 ZNF670Q9BS34 389 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 TMUB1Q9BVT8 246 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 KLC2Q9H0B6 622 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 NOL6Q9H6R4 1146 aaKnown RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 KCNK12Q9HB15 430 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 SPHK2Q9NRA0 654 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 DDX56Q9NY93 547 aaKnown RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 GTSE1Q9NYZ3 720 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 SLC12A6Q9UHW9 1150 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 SNX12Q9UMY4 172 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 R3HDM2Q9Y2K5 976 aaKnown RBP8.31□□□□□ -1.08
MDC1-203ENST00000417033 NR2E1Q9Y466 385 aa8.31□□□□□ -1.08
MDC1-203ENST00000417033 A0A0C4DFX4 3053 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 CTAGE9A4FU28 777 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 CEP104O60308 925 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 ZRANB2O95218 330 aaKnown RBP eCLIP8.3□□□□□ -1.08
MDC1-203ENST00000417033 PENKP01210 267 aaPredicted RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 BMP1P13497 986 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 ARL4AP40617 200 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 AIF1P55008 147 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 GBE1Q04446 702 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 SLC10A2Q12908 348 aaPredicted RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 PDK2Q15119 407 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 SIX1Q15475 284 aaPredicted RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 ANO4Q32M45 955 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 C5orf22Q49AR2 442 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 FSCBQ5H9T9 825 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 CXorf57Q6NSI4 855 aaKnown RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 C1orf228Q6PIY5 440 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 ARHGAP12Q8IWW6 846 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 ADHFE1Q8IWW8 467 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 YAF2Q8IY57 180 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 RCOR2Q8IZ40 523 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 ADGRG2Q8IZP9 1017 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 SLC44A3Q8N4M1 653 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 PLD5Q8N7P1 536 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 NAT16Q8N8M0 369 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 HJURPQ8NCD3 748 aaPredicted RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 DDI1Q8WTU0 396 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 DEPDC1BQ8WUY9 529 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 IRF7Q92985 503 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 TMA16Q96EY4 203 aaKnown RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 RBM41Q96IZ5 413 aaKnown RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 CAPZA3Q96KX2 299 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 C1orf74Q96LT6 269 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 RNF157Q96PX1 679 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 TRMT61BQ9BVS5 477 aaKnown RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 BBS2Q9BXC9 721 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 OSBPL8Q9BZF1 889 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 ZYG11BQ9C0D3 744 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 ECT2Q9H8V3 914 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 CD320Q9NPF0 282 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 TBC1D14Q9P2M4 693 aa8.3□□□□□ -1.08
MDC1-203ENST00000417033 SAE1Q9UBE0 346 aaPredicted RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.3□□□□□ -1.08
MDC1-203ENST00000417033 TCF20Q9UGU0 1960 aaKnown RBP8.3□□□□□ -1.08
MDC1-203ENST00000417033 COL4A2P08572 1712 aa8.29□□□□□ -1.08
MDC1-203ENST00000417033 A0A0D9SEW6 157 aa8.29□□□□□ -1.08
MDC1-203ENST00000417033 A0A1B0GVM2 712 aa8.29□□□□□ -1.08
MDC1-203ENST00000417033 TCAF2A6NFQ2 919 aa8.29□□□□□ -1.08
MDC1-203ENST00000417033 SLC9A3R1O14745 358 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms