RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 WDR78Q5VTH9 848 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 HEATR6Q6AI08 1181 aaKnown RBP10.11□□□□□ -0.79
SS18-203ENST00000415083 ADGRG6Q86SQ4 1221 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 GALNT15Q8N3T1 639 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 ARRDC4Q8NCT1 418 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 NLGN2Q8NFZ4 835 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 SLC2A14Q8TDB8 520 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 STMN2Q93045 179 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 C1QTNF1Q9BXJ1 281 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 PRDM12Q9H4Q4 367 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 ZNF385DQ9H6B1 395 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 COG4Q9H9E3 785 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 PAPOLBQ9NRJ5 636 aaKnown RBP10.11□□□□□ -0.79
SS18-203ENST00000415083 DNAJB4Q9UDY4 337 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 SNX10Q9Y5X0 201 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.11□□□□□ -0.79
SS18-203ENST00000415083 LOC100653049A0A140TA62 436 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 MAGEA13PA6NCF6 341 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 KCNK1O00180 336 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 NRP1O14786 923 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 KRT34O76011 436 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 FBXO21O94952 628 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 SERPINE1P05121 402 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 SKIP12755 728 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 PGAM1P18669 254 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 GLDCP23378 1020 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 ADCYAP1R1P41586 468 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 GLUD2P49448 558 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 RAB27AP51159 221 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 GK3PQ14409 553 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 PDPK2PQ6A1A2 396 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 FSTL4Q6MZW2 842 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 SLC30A9Q6PML9 568 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 TRIM42Q8IWZ5 723 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 CRYBG2Q8N1P7 616 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 ANKRD52Q8NB46 1076 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 OCEL1Q9H607 264 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 BAG2O95816 211 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 GABRB3P28472 473 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 PAPOLAP51003 745 aaKnown RBP10.11□□□□□ -0.79
SS18-203ENST00000415083 DSG1Q02413 1049 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 ZBTB17Q13105 803 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 SEMA3BQ13214 749 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 DNAL1Q4LDG9 190 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 EFHC1Q5JVL4 640 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 BSPRYQ5W0U4 402 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 DHDDSQ86SQ9 333 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 KBTBD6Q86V97 674 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 OR6B3Q8NGW1 331 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 ACMSDQ8TDX5 336 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 MFSD3Q96ES6 412 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 SGIP1Q9BQI5 828 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 EIF2B3Q9NR50 452 aaKnown RBP10.11□□□□□ -0.79
SS18-203ENST00000415083 DCXO43602 365 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 GLRA3O75311 464 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 SMIM18P0DKX4 95 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 SETSIPP0DME0 302 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 P4HA1P13674 534 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 EPHB1P54762 984 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 GRM2Q14416 872 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 AP1ARQ63HQ0 302 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 BHLHA9Q7RTU4 235 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 GPRIN1Q7Z2K8 1008 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 LSMEM2Q8N112 164 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 RNF139Q8WU17 664 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 NCSTNQ92542 709 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 CERS2Q96G23 380 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 NPY6RQ99463 290 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 RBBP8Q99708 897 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 CYP4F11Q9HBI6 524 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 WDR6Q9NNW5 1121 aaKnown RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 PPP2R3BQ9Y5P8 575 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 GOLGA8TH3BQL2 631 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 SNAI1O95863 264 aaPredicted RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 PTPN3P26045 913 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 MATKP42679 507 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 NSUN2Q08J23 767 aaKnown RBP eCLIP10.1□□□□□ -0.79
SS18-203ENST00000415083 BST2Q10589 180 aaKnown RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 CNPY1Q3B7I2 92 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 ZNF792Q3KQV3 632 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 CERCAMQ5T4B2 595 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 LGSNQ5TDP6 509 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 CASC4Q6P4E1 433 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 ISLR2Q6UXK2 745 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 TMEM135Q86UB9 458 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 EXOC8Q8IYI6 725 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 DEFB107AQ8IZN7 70 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 NR1H4Q96RI1 486 aaPredicted RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 SH3GL3Q99963 347 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 WDR55Q9H6Y2 383 aaPredicted RBP10.1□□□□□ -0.79
SS18-203ENST00000415083 NDE1Q9NXR1 346 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 UBAP1Q9NZ09 502 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 KLK14Q9P0G3 267 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 PCDHB12Q9Y5F1 795 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 SCN4AP35499 1836 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 E9PBE3 544 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 GRID2O43424 1007 aa10.1□□□□□ -0.79
SS18-203ENST00000415083 KLHL41O60662 606 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms