RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 RNASEH2AO75792 299 aaKnown RBP12.6□□□□□ -0.39
LIMS2-210ENST00000413578 LDOC1O95751 146 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-210ENST00000413578 ITGAVP06756 1048 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 SRPRAP08240 638 aaKnown RBP12.6□□□□□ -0.39
LIMS2-210ENST00000413578 SLC8A1P32418 973 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 HNF1BP35680 557 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 RXRGP48443 463 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 RGS7P49802 495 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 ADPRHP54922 357 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 YWHAEP62258 255 aaKnown RBP12.6□□□□□ -0.39
LIMS2-210ENST00000413578 SFSWAPQ12872 951 aaKnown RBP12.6□□□□□ -0.39
LIMS2-210ENST00000413578 CNGA2Q16280 664 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 MS4A13Q5J8X5 152 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 PITRM1Q5JRX3 1037 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 C6orf118Q5T5N4 469 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 MMAAQ8IVH4 418 aaKnown RBP12.6□□□□□ -0.39
LIMS2-210ENST00000413578 CACTIN-AS1Q8N1I8 211 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
LIMS2-210ENST00000413578 PIP4K2CQ8TBX8 421 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 DQX1Q8TE96 717 aaKnown RBP12.6□□□□□ -0.39
LIMS2-210ENST00000413578 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 SKA1Q96BD8 255 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 HSFY1Q96LI6 401 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 NRSN2Q9GZP1 204 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 ERVMER34-1Q9H9K5 563 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 GDF3Q9NR23 364 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 STIM2Q9P246 746 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 SLCO3A1Q9UIG8 710 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 ERVW-1Q9UQF0 538 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 BPTFQ12830 3046 aa12.6□□□□□ -0.39
LIMS2-210ENST00000413578 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 RNF225M0QZC1 329 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 ATXN7O15265 892 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 PMM2O15305 246 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 FBXO21O94952 628 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 LUC7L3O95232 432 aaKnown RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 PRB1P04280 392 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 JUPP14923 745 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 GOT1P17174 413 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 ABCB4P21439 1286 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 TBXAS1P24557 533 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 DRD3P35462 400 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 PMS1P54277 932 aaKnown RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 PPP2CBP62714 309 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 PPP2CAP67775 309 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 TARDBPQ13148 414 aaKnown RBP eCLIP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 DCAF17Q5H9S7 520 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 HES3Q5TGS1 186 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 TCERG1LQ5VWI1 586 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 TMEM270Q6UE05 265 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 SPATS2Q86XZ4 545 aaKnown RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 EID2Q8N6I1 236 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 GANCQ8TET4 914 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 RFFLQ8WZ73 363 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 SERPINB11Q96P15 392 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 DCBLD2Q96PD2 775 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 DDX50Q9BQ39 737 aaKnown RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 AASDHPPTQ9NRN7 309 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 ARHGAP20Q9P2F6 1191 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 XPO7Q9UIA9 1087 aaKnown RBP12.59□□□□□ -0.39
LIMS2-210ENST00000413578 TLR6Q9Y2C9 796 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 ZNF462Q96JM2 2506 aa12.59□□□□□ -0.39
LIMS2-210ENST00000413578 EIF4E1BA6NMX2 242 aaKnown RBP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 TLR4O00206 839 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 PIK3R2O00459 728 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 PLXNA2O75051 1894 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 ZNF202O95125 648 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 ADH1BP00325 375 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 C5AR1P21730 350 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 PRCPP42785 496 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 ARRB1P49407 418 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 KRT85P78386 507 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 FKBP3Q00688 224 aaKnown RBP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 ECT2LQ008S8 904 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 LRMPQ12912 555 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 BNIP3Q12983 259 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 ILKQ13418 452 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 EIF4EBP2Q13542 120 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 CDH18Q13634 790 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 NAPEPLDQ6IQ20 393 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 SND1Q7KZF4 910 aaKnown RBP eCLIP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 BEND5Q7L4P6 421 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 IQCHQ86VS3 1027 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 APCDD1Q8J025 514 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 CFAP52Q8N1V2 620 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 STK40Q8N2I9 435 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 CARNMT1Q8N4J0 409 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 LSM14AQ8ND56 463 aaKnown RBP12.58□□□□□ -0.4
LIMS2-210ENST00000413578 LMO3Q8TAP4 145 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 FRS2Q8WU20 508 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 KAT5Q92993 513 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 SERAC1Q96JX3 654 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 OMDQ99983 421 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 NAALADL1Q9UQQ1 740 aa12.58□□□□□ -0.4
LIMS2-210ENST00000413578 RAI2Q9Y5P3 530 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms