RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CERS2Q96G23 380 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 RBBP8Q99708 897 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 FERMT1Q9BQL6 677 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 UBAP1Q9NZ09 502 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 RCOR3Q9P2K3 495 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 MID2Q9UJV3 735 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 LZTS1Q9Y250 596 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 CRTAMO95727 393 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 PIK3R1P27986 724 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 HSPA1LP34931 641 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 NBPF12Q5TAG4 269 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 BORAQ6PGQ7 559 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 BNC2Q6ZN30 1099 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 TTC30AQ86WT1 665 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 DCLK2Q8N568 766 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 DDI1Q8WTU0 396 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 IRGQQ8WZA9 623 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 FAM210AQ96ND0 272 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 RBM38Q9H0Z9 239 aaKnown RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 MINDY3Q9H8M7 445 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 SYBUQ9NX95 663 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 GGA3Q9NZ52 723 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 RIMS3Q9UJD0 308 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 PADI4Q9UM07 663 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 DMTF1Q9Y222 760 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 USP3Q9Y6I4 520 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 G3V2L1 256 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 TRIM13O60858 407 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 LIMK2P53671 638 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 HERC3Q15034 1050 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 ADRM1Q16186 407 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 PPP1R26Q5T8A7 1209 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-202ENST00000413219 CLEC14AQ86T13 490 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 SCUBE3Q8IX30 993 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 CPSF7Q8N684 471 aaKnown RBP18.04■□□□□ 0.48
SDCBP-202ENST00000413219 C12orf29Q8N999 325 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 TDRD5Q8NAT2 981 aaKnown RBP18.04■□□□□ 0.48
SDCBP-202ENST00000413219 GPR20Q99678 358 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 CIDEBQ9UHD4 219 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 AP4B1Q9Y6B7 739 aa18.04■□□□□ 0.48
SDCBP-202ENST00000413219 RANBP1P43487 201 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 GLUD2P49448 558 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 NUDT2P50583 147 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 POU5F1BQ06416 359 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 FLOT2Q14254 428 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 ZNF423Q2M1K9 1284 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 SLC10A6Q3KNW5 377 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 NADK2Q4G0N4 442 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 PIGGQ5H8A4 983 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 SLC26A9Q7LBE3 791 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 NT5DC4Q86YG4 428 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 DSELQ8IZU8 1212 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 SLC7A14Q8TBB6 771 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 MAPK15Q8TD08 544 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 LZICQ8WZA0 190 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 ILKAPQ9H0C8 392 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-202ENST00000413219 MAN1C1Q9NR34 630 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 ZNF358Q9NW07 568 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 EP400Q96L91 3159 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 RNF103O00237 685 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 ERVK-10P10266 1014 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 TFE3P19532 575 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-202ENST00000413219 ARL4AP40617 200 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 KLHDC10Q6PID8 442 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 NAPRTQ6XQN6 538 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 OR52B2Q96RD2 323 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 WRNIP1Q96S55 665 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 OXCT2Q9BYC2 517 aaPredicted RBP18.03■□□□□ 0.48
SDCBP-202ENST00000413219 DPP3Q9NY33 737 aa18.03■□□□□ 0.48
SDCBP-202ENST00000413219 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.02■□□□□ 0.48
SDCBP-202ENST00000413219 ARHGAP10A1A4S6 786 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 MATN2O00339 956 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 AIM2O14862 343 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 ZNF189O75820 626 aaPredicted RBP18.02■□□□□ 0.48
SDCBP-202ENST00000413219 GABBR2O75899 941 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 APOA4P06727 396 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 GJB1P08034 283 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 SRGAP2BP0DMP2 458 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 CYP2C8P10632 490 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 PHKA2P46019 1235 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 THOP1P52888 689 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 PRKAA2P54646 552 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 APOFQ13790 326 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 CMC1Q7Z7K0 106 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 SNX32Q86XE0 403 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 PGAM4Q8N0Y7 254 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 ZNF668Q96K58 619 aaPredicted RBP18.02■□□□□ 0.48
SDCBP-202ENST00000413219 SUDS3Q9H7L9 328 aaPredicted RBP18.02■□□□□ 0.48
SDCBP-202ENST00000413219 TIMMDC1Q9NPL8 285 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 IRAK4Q9NWZ3 460 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 IGSF9Q9P2J2 1179 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 THEGQ9P2T0 379 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 CNOT11Q9UKZ1 510 aaKnown RBP18.02■□□□□ 0.48
SDCBP-202ENST00000413219 RAP2CQ9Y3L5 183 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 RPS6KL1Q9Y6S9 549 aa18.02■□□□□ 0.48
SDCBP-202ENST00000413219 PRSS51A0A1B0GVH4 220 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 SOWAHBA6NEL2 793 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 HDAC3O15379 428 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 EGFRP00533 1210 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 IQCF3P0C7M6 154 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms