RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 EPAS1Q99814 870 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 GABRG3Q99928 467 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 NUP85Q9BW27 656 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 ZYG11BQ9C0D3 744 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 SEMA4AQ9H3S1 761 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 RBM12Q9NTZ6 932 aaKnown RBP8.47□□□□□ -1.05
RPE-204ENST00000411934 ABCB8Q9NUT2 735 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 TMEM248Q9NWD8 314 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 ELOVL2Q9NXB9 296 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 PLK2Q9NYY3 685 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 THAP10Q9P2Z0 257 aaPredicted RBP8.47□□□□□ -1.05
RPE-204ENST00000411934 OR12D3Q9UGF7 316 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 EBF1Q9UH73 591 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 ANAPC7Q9UJX3 599 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 VANGL2Q9ULK5 521 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 FZD10Q9ULW2 581 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 PCDHGA2Q9Y5H1 932 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 FANCMQ8IYD8 2048 aa8.47□□□□□ -1.05
RPE-204ENST00000411934 CACNA1HO95180 2353 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 GOLGA6L7A0A1B0GV03 622 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ILVBLA1L0T0 632 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 GOLGA6L3A6NEY3 463 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 BTNL10A8MVZ5 291 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 WASH4PA8MWX3 477 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 PRRT4C9JH25 899 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 I6L893 689 aaPredicted RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 NRDCO43847 1150 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 TSPAN3O60637 253 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ALDH1A2O94788 518 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 NDUFA10O95299 355 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 GJB6O95452 261 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 SRPRAP08240 638 aaKnown RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 DLDP09622 509 aaKnown RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 RHOQP17081 205 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 POLR2EP19388 210 aaKnown RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 HCAR3P49019 387 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ATXN1P54253 815 aaKnown RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 OGDHQ02218 1023 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 MESP2Q0VG99 397 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 LMAN2Q12907 356 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ZNF177Q13360 481 aaPredicted RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 STARD3Q14849 445 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 CRY1Q16526 586 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 DPYSL2Q16555 572 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 HADHQ16836 314 aaKnown RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 GEN1Q17RS7 908 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ERMARDQ5T6L9 678 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 SH3PXD2AQ5TCZ1 1133 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 MBLAC2Q68D91 279 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 NAIF1Q69YI7 327 aaPredicted RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 SDE2Q6IQ49 451 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 CXorf57Q6NSI4 855 aaKnown RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 POLNQ7Z5Q5 900 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 ADIPOR2Q86V24 386 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 C11orf74Q86VG3 221 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 WDR5BQ86VZ2 330 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 RASSF3Q86WH2 238 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 CARNMT1Q8N4J0 409 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 DCAF4L2Q8NA75 395 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ZBTB44Q8NCP5 570 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 PRSS33Q8NF86 280 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 UBE2Q2Q8WVN8 375 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 BHMTQ93088 406 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 IGSF8Q969P0 613 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 RNF166Q96A37 237 aaPredicted RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 SIK2Q9H0K1 926 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 CATSPERBQ9H7T0 1116 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 POLMQ9NP87 494 aaPredicted RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 ANLNQ9NQW6 1124 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ZSCAN32Q9NX65 697 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 CTTNBP2NLQ9P2B4 639 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 RCOR3Q9P2K3 495 aaPredicted RBP8.46□□□□□ -1.06
RPE-204ENST00000411934 MYO1AQ9UBC5 1043 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 ZNF212Q9UDV6 495 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 USP18Q9UMW8 372 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 SLC8A2Q9UPR5 921 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 NEU3Q9UQ49 428 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 CKAP5Q14008 2032 aa8.46□□□□□ -1.06
RPE-204ENST00000411934 PLXND1Q9Y4D7 1925 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 CHD5Q8TDI0 1954 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 ZNF487B1APH4 448 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 K7ESF4 209 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 LILRB5O75023 590 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 LRIG2O94898 1065 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 PROSCO94903 275 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 KLF8O95600 359 aaPredicted RBP8.45□□□□□ -1.06
RPE-204ENST00000411934 APBB3O95704 486 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 KRT7P08729 469 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 SP9P0CG40 484 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 HOXB2P14652 356 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 COL9A1P20849 921 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 MIPP30301 263 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 NBL1P41271 181 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 SLC1A1P43005 524 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 GEMIN4P57678 1058 aaKnown RBP8.45□□□□□ -1.06
RPE-204ENST00000411934 YBEYP58557 167 aaPredicted RBP8.45□□□□□ -1.06
RPE-204ENST00000411934 ST8SIA6P61647 398 aa8.45□□□□□ -1.06
RPE-204ENST00000411934 KRT83P78385 493 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms