RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 TRIM11Q96F44 468 aa18.82■□□□□ 0.6
RFC4-203ENST00000411792 C1orf74Q96LT6 269 aa18.82■□□□□ 0.6
RFC4-203ENST00000411792 SYT11Q9BT88 431 aa18.82■□□□□ 0.6
RFC4-203ENST00000411792 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.82■□□□□ 0.6
RFC4-203ENST00000411792 PARVAQ9NVD7 372 aa18.82■□□□□ 0.6
RFC4-203ENST00000411792 SDK1Q7Z5N4 2213 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 GZMAP12544 262 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 RRM1P23921 792 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 NNMTP40261 264 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 CDH4P55283 916 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 TRIM14Q14142 442 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 PLEKHG6Q3KR16 790 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 WDR59Q6PJI9 974 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 BNIPLQ7Z465 357 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 OLIG1Q8TAK6 271 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 RLN3Q8WXF3 142 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 TTC17Q96AE7 1141 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 ZC3H10Q96K80 434 aaKnown RBP18.81■□□□□ 0.6
RFC4-203ENST00000411792 MRGPRX1Q96LB2 322 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 TAS2R14Q9NYV8 317 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 SUN2Q9UH99 717 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 MYO18AQ92614 2054 aaKnown RBP18.81■□□□□ 0.6
RFC4-203ENST00000411792 RALGAPA1Q6GYQ0 2036 aa18.81■□□□□ 0.6
RFC4-203ENST00000411792 SRGAP2O75044 1071 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 ENDOD1O94919 500 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 FTLP02792 175 aaPredicted RBP18.8■□□□□ 0.6
RFC4-203ENST00000411792 SERPING1P05155 500 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 SRPRAP08240 638 aaKnown RBP18.8■□□□□ 0.6
RFC4-203ENST00000411792 ACADMP11310 421 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 HLA-EP13747 358 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 P2RY2P41231 377 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 ZNF143P52747 638 aaPredicted RBP18.8■□□□□ 0.6
RFC4-203ENST00000411792 ECT2LQ008S8 904 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 SULT2A1Q06520 285 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 PTPRNQ16849 979 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 SPECC1LQ69YQ0 1117 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 SLC36A4Q6YBV0 504 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 LPCAT2Q7L5N7 544 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 C14orf80Q86SX3 495 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 PRCCQ92733 491 aaPredicted RBP18.8■□□□□ 0.6
RFC4-203ENST00000411792 LMLNQ96KR4 655 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 MUC3BQ9H195 1237 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 TMEM245Q9H330 911 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 FBRSQ9HAH7 460 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 PRDM16Q9HAZ2 1276 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 ANLNQ9NQW6 1124 aa18.8■□□□□ 0.6
RFC4-203ENST00000411792 EML5Q05BV3 1969 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 E9PAM4 449 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 DDX3XO00571 662 aaKnown RBP eCLIP18.79■□□□□ 0.66e-13■■■□□ 17.4
RFC4-203ENST00000411792 LRP3O75074 770 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 RTN2O75298 545 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 GYPCP04921 128 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 RHOCP08134 193 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 MYBL1P10243 752 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 TSR1Q2NL82 804 aaKnown RBP18.79■□□□□ 0.6
RFC4-203ENST00000411792 MAP7D1Q3KQU3 841 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 C5orf22Q49AR2 442 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 TMPRSS6Q8IU80 811 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 OR2T3Q8NH03 318 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 ZNF653Q96CK0 615 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 SIPA1Q96FS4 1042 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 ARRDC1-AS1Q9H2J1 176 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 CD248Q9HCU0 757 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 PARD6AQ9NPB6 346 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 TMPRSS4Q9NRS4 437 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 VPS28Q9UK41 221 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 INTS6Q9UL03 887 aaKnown RBP18.79■□□□□ 0.6
RFC4-203ENST00000411792 ERVW-1Q9UQF0 538 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 PCDHGA5Q9Y5G8 931 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 SNX10Q9Y5X0 201 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 SCINQ9Y6U3 715 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 SPAG17Q6Q759 2223 aa18.79■□□□□ 0.6
RFC4-203ENST00000411792 WDR87Q6ZQQ6 2873 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 TCRBV5S1A1TA0A578 114 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 EPN2O95208 641 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 BCKDHBP21953 392 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 CASP14P31944 242 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 ADRA1BP35368 520 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 DHPSP49366 369 aaPredicted RBP18.78■□□□□ 0.6
RFC4-203ENST00000411792 HDAC4P56524 1084 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 RPL7AP62424 266 aaKnown RBP18.78■□□□□ 0.6
RFC4-203ENST00000411792 CREB5Q02930 508 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 LMNB2Q03252 620 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 CAMK2GQ13555 558 aaPredicted RBP18.78■□□□□ 0.6
RFC4-203ENST00000411792 CCDC6Q16204 474 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 RSPO4Q2I0M5 234 aaPredicted RBP18.78■□□□□ 0.6
RFC4-203ENST00000411792 C6orf118Q5T5N4 469 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 SH3PXD2AQ5TCZ1 1133 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 PMS2CLQ68D20 193 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 CXorf57Q6NSI4 855 aaKnown RBP18.78■□□□□ 0.6
RFC4-203ENST00000411792 SCYL2Q6P3W7 929 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 APCDD1Q8J025 514 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 ZNF366Q8N895 744 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 KDM1BQ8NB78 822 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 CENPIQ92674 756 aaPredicted RBP18.78■□□□□ 0.6
RFC4-203ENST00000411792 RMDN1Q96DB5 314 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 CNPY3Q9BT09 278 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 ZYG11BQ9C0D3 744 aa18.78■□□□□ 0.6
RFC4-203ENST00000411792 DUSP15Q9H1R2 295 aaPredicted RBP18.78■□□□□ 0.6
RFC4-203ENST00000411792 SLC6A17Q9H1V8 727 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms